All Publications

Pages

1. • Journal article

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   Analysing ambiguities in trypanosomatids taxonomy by barcoding.

   Boucinha, Carolina Caetano, Amanda R Santos, Helena Lc Helaers, Raphaël[UCL] Vikkula, Miikka[UCL] Branquinha, Marta Helena Dos Santos, André Luis Souza Grellier, Philippe Morelli, Karina Alessandra d'Avila-Levy, Claudia Masini (2020) Memorias do Instituto Oswaldo Cruz — Vol. 115, p. e200504 [1-14] (2020)
2. • Journal article

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   How to choose the right real-time RT-PCR primer sets for the SARS-CoV-2 genome detection?

   Anantharajah, Ahalieyah[UCL] Helaers, Raphaël[UCL] Defour, Jean-Philippe[UCL] Olive, Nathalie[UCL] Kabera, Florence[UCL] Croonen, Luc[UCL] Deldime, Françoise[UCL] Vaerman, Jean-Luc[UCL] Barbée, Cindy[UCL] Bodéus, Monique[UCL] Scohy, Anaïs[UCL] Verroken, Alexia[UCL] Rodriguez-Villalobos, Hector[UCL] Kabamba-Mukadi, Benoît[UCL] (2021) Journal of virological methods — Vol. 295, p. 114197 [1-7] (2021)
3. • Speech

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   Co-segregation of rare possibly-damaging variants in cancer-related genes correlates with phenotypic homogeneity in familial breast cancer

   van Marcke, Cédric[UCL] Helaers, Raphaël[UCL] Schoonjans, Céline[UCL] Ambroise, Jérôme[UCL] Berlière, Martine[UCL] canon, Jean-Luc Vuylsteke, Peter[UCL] Machiels, Jean-Pascal[UCL] Vikkula, Miikka[UCL] Duhoux, François[UCL] (2019) San Antonio Breast Cancer Symposium — San Antonio
4. • Speech

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   Découverte et caractérisation d’une nouvelle forme de pancréatite chronique

   Fages, Angeline Emmanuelle[UCL] Rajput Bhatti, Memoona[UCL] Helaers, Raphaël[UCL] Loriot, Axelle[UCL] Achouri, Younes[UCL] Scheers, Isabelle[UCL] Jacquemin, P (2022) XXXVIème réunion du Club Français du Pancréas — Paris, France
5. • Journal article

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   First Draft Genome of the Trypanosomatid Herpetomonas muscarum ingenoplastis through MinION Oxford Nanopore Technology and Illumina Sequencing

   d'Avila-Levy, Claudia M[UCL] Bearzatto, Bertrand Ambroise, Jérôme Helaers, Raphaël Butenko, Anzhelika Yurchenko, Vyacheslav Morelli, Karina A Santos, Helena L C Brouillard, Pascal[UCL] Grellier, Philippe Gala, Jean-Luc[UCL] Vikkula, Miikka[UCL] (2020) Tropical medicine and infectious disease — Vol. 5, no. 1, p. 25 (2020)
6. • Journal article

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   MANTIS : a phylogenetic framework for multi-species genome comparisons.

   Helaers, Raphaël[UCL] Tzika, Athanasia C Van de Peer, Yves Milinkovitch, Michel C (2008) Bioinformatics (Oxford, England) — Vol. 24, no. 2, p. 151-157 (2008)
7. • Journal article

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   MetaPIGA v2.0 : maximum likelihood large phylogeny estimation using the metapopulation genetic algorithm and other stochastic heuristics

   Helaers, Raphaël[UCL] Milinkovitch, Michel C (2010) BMC bioinformatics — Vol. 11, p. 379 (2010)
8. • Journal article

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   Considerations for the inclusion of 2x mammalian genomes in phylogenetic analyses (a response to Vilella et al.’s correspondence)

   Milinkovitch, Michel C. Helaers, Raphaël[UCL] Depiereux, Eric Tzika, Athanasia C. Gabaldon, Toni (2010) Genome Biology — Vol. 12, no.2, p. 401 (21 February 2011)
9. • Speech

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   Deciphering the genetic background of high-risk BRCA 1/2 mutation-negative breast cancer patients

   van Marcke, Cédric[UCL] Schoonjans, Céline[UCL] Helaers, Raphaël[UCL] Amyere, Mustapha[UCL] Vikkula, Miikka[UCL] Duhoux, François[UCL] (2016) First Joint Meeting of the Belgian Society of Human Genetics & Dutch Society for Human Genetics — Leuven
10. • Journal article

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    Somatic Activating PIK3CA Mutations Cause Venous Malformation

    Limaye, Nisha[UCL] Kangas, Jaakko Mendola, Antonella[UCL] Godfraind, Catherine Schlögel, Matthieu[UCL] Helaers, Raphaël[UCL] Eklund, Lauri Boon, Laurence M.[UCL] Vikkula, Miikka[UCL] (2015) American Journal of Human Genetics — Vol. 97, no. 6, p. 914-921 (2015)
11. • Journal article

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    KIF1B and NF1 are the most frequently mutated genes in paraganglioma tumors

    Evenepoel, Lucie[UCL] Helaers, Raphaël[UCL] Vroonen, Laurent Aydin, Selda[UCL] Hamoir, Marc[UCL] Maiter, Dominique[UCL] Vikkula, Miikka[UCL] Persu, Alexandre[UCL] (2017) Endocrine - Related Cancer — Vol. 24, no. 8, p. L57-L61 (2017)
12. • Journal article

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    Non-hotspot PIK3CA mutations are more frequent in CLOVES than in common or combined lymphatic malformations.

    Brouillard, Pascal[UCL] Schlögel, Matthieu[UCL] Homayun Sepehr, Nassim[UCL] Helaers, Raphaël[UCL] Queisser, Angela[UCL] Fastré, Elodie[UCL] Boutry, Simon[UCL] Schmitz, Sandra[UCL] Clapuyt, Philippe[UCL] Hammer, Frank[UCL] Dompmartin, Anne[UCL] Weitz-Tuoretmaa, Annamaria Laranne, Jussi Pasquesoone, Louise Vilain, Catheline Boon, Laurence M.[UCL] Vikkula, Miikka[UCL] (2021) Orphanet journal of rare diseases — Vol. 16, no. 1, p. 267 [1-12] (2021)
13. • Speech

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    Minimal residual disease (MRD) diagnosed by a plasma tumor-agnostic circulating tumor DNA (ctDNA) assay after curative therapy in locally advanced (LA) squamous cell carcinoma of the head and neck (SCCHN) predicts disease relapse and survival

    Honoré, Natasha[UCL] van Marcke, Cédric[UCL] Galot, Rachel[UCL] Helaers, Raphaël[UCL] Van Maanen, Aline[UCL] Ambroise, Jérôme[UCL] Mendola, Antonella[UCL] Dahou, Hajar[UCL] Marbaix, Etienne[UCL] Van Eeckhout, Pascal[UCL] longton, Eléonore[UCL] Magremanne, Michèle[UCL] Schmitz, Sandra[UCL] Limaye, Nisha[UCL] Machiels, Jean-Pascal[UCL] (2023) ESMO Congress 2023 — Madrid
14. • Journal article

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    KRAS-driven model of Gorham-Stout disease effectively treated with trametinib

    Homayun Sepehr, Nassim[UCL] McCarter, Anna L. Helaers, Raphaël[UCL] Galant, Christine[UCL] Boon, Laurence M.[UCL] Brouillard, Pascal[UCL] Vikkula, Miikka[UCL] Dellinger, Michael T. (2021) Journal of Clinical Investigation Insight — Vol. 6, no. 15, p. e149831 (2021)
15. • Journal article

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    Dysregulation of Rho GTPases in orofacial cleft patients-derived primary cells leads to impaired cell migration, a potential cause of cleft/lip palate development.

    El-Sibai, Mirvat El Hajj, Joelle Al Haddad, Maria El Baba, Nada Al Saneh, Mounir Daoud Khatoun, Wassim Helaers, Raphaël[UCL] Vikkula, Miikka[UCL] El Atat, Oula Sabbagh, Joseph Abou Chebel, Naji Ghassibe-Sabbagh, Michella (2021) Cells & development — Vol. 165, p. 203656 (2021)
16. • Journal article

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    Historical constraints on vertebrate genome evolution.

    Milinkovitch, Michel C. Helaers, Raphaël[UCL] Tzika, Athanasia C. (2010) Genome biology and evolution — Vol. 2, p. 13-18 (2010)
17. • Speech

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    Liquid biopsy for mutational profiling of locoregional recurrent (LR) and/or metastatic (M) squamous cell carcinoma of the head and neck (SCCHN)

    Galot, Rachel[UCL] van Marcke, Cédric[UCL] Helaers, Raphaël[UCL] Mendola, Antonella[UCL] Goebbels, Rose-Marie[UCL] Caignet, Xavier[UCL] Ambroise, Jérôme[UCL] Wittouck, Kyril[UCL] Vikkula, Miikka[UCL] Limaye, Nisha[UCL] Machiels, Jean-Pascal[UCL] (2019) ESMO — Barcelona
18. • Speech

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    Tumor sequencing is useful to reclassify germline variants in unexplained high-risk breast cancer

    van Marcke, Cédric[UCL] Helaers, Raphaël[UCL] Schoonjans, Céline[UCL] Berlière, Martine[UCL] De Leener, Anne[UCL] canon, Jean-Luc Vuylsteke, Peter[UCL] Machiels, Jean-Pascal[UCL] Limaye, Nisha[UCL] Vikkula, Miikka[UCL] Duhoux, François[UCL] (2019) San Antonio Breast Cancer Symposium — San Antonio
19. • Journal article

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    Reptilian-transcriptome v1.0, a glimpse in the brain transcriptome of five divergent Sauropsida lineages and the phylogenetic position of turtles

    Tzika, Athanasia C. Helaers, Raphaël[UCL] Schramm, Gerrit Milinkovitch, Michel C. (2011) EvoDevo — Vol. 2, no. 1 (2011)
20. • Journal article

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    gViz, a novel tool for the visualization of co-expression networks

    Helaers, Raphaël[UCL] Bareke, Eric De Meulder, Bertrand Pierre, Michael Depiereux, Sophie Habra, Naji Depiereux, Eric (2011) BMC Research Notes — Vol. 4 (2011)
21. • Journal article

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    Meta-Analysis of Microarray Data of Rainbow Trout Fry Gonad Differentiation Modulated by Ethynylestradiol

    Depiereux, Sophie[FUNDP] Le Gac, Florence De Meulder, Bertrand[FUNDP] Pierre, Michael[FUNDP] Helaers, Raphaël[UCL] Guiguen, Yann Kestemont, Patrick[FUNDP] Depiereux, Eric[FUNDP] (2015) PLoS One — Vol. 10, no.9, p. e0135799 (2015)
22. • Speech

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    Abstract P5-03-03: Tumor sequencing is useful to reclassify germline variants in unexplained high-risk breast cancer families

    van Marcke, Cédric[UCL] Helaers, Raphaël[UCL] Schoonjans, Céline[UCL] Berliere, Martine[UCL] De Leener, Anne[UCL] Canon, Jean-Luc Vuylsteke, Peter Machiels, Jean-Pascal[UCL] Limaye, Nisha[UCL] Vikkula, Miikka[UCL] Duhoux, Francois[UCL] (2020) Abstracts: 2019 San Antonio Breast Cancer Symposium; December 10-14, 2019; San Antonio, Texas — San Antonio, Texas
23. • Journal article

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    Tumor sequencing is useful to refine the analysis of germline variants in unexplained high-risk breast cancer families.

    van Marcke, Cédric[UCL] Helaers, Raphaël[UCL] De Leener, Anne[UCL] Merhi, Ahmad[UCL] Schoonjans, Céline Ambroise, Jérôme[UCL] Galant, Christine[UCL] Delrée, Paul Rothé, Françoise Bar, Isabelle Khoury, Elsa[UCL] Brouillard, Pascal[UCL] Canon, Jean-Luc Vuylsteke, Peter[UCL] Machiels, Jean-Pascal[UCL] Berliere, Martine[UCL] Limaye, Nisha[UCL] Vikkula, Miikka[UCL] Duhoux, François[UCL] (2020) Breast cancer research — Vol. 22, no. 1, p. 36 (2020)
24. • Journal article

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    Somatic loss-of-function PIK3R1 and activating non-hotspot PIK3CA mutations associated with Capillary Malformation with Dilated Veins (CMDV)

    De Bortoli, Martina[UCL] Queisser, Angela[UCL] Pham, Van Cuong Dompmartin, Anne Helaers, Raphaël[UCL] Boutry, Simon[UCL] Claus, Cathy[UCL] De Roo, An-Katrien[UCL] Hammer, Frank[UCL] Brouillard, Pascal[UCL] Abdelilah-Seyfried, Salim Boon, Laurence M.[UCL] Vikkula, Miikka[UCL] (2024) Journal of Investigative Dermatology — Vol. 144, no. 9, p. 2066-2077 (2024)
25. • Journal article

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    Blue Rubber Bleb Nevus (BRBN) Syndrome Is Caused by Somatic TEK (TIE2) Mutations.

    Soblet, Julie[UCL] Kangas, Jaakko Nätynki, Marjut Mendola, Antonella[UCL] Helaers, Raphaël[UCL] Uebelhoer, Mélanie Kaakinen, Mika Cordisco, Maria Dompmartin, Anne Enjolras, Odile Holden, Simon Irvine, Alan D Kangesu, Loshan Léauté-Labrèze, Christine Lanoel, Agustina Lokmic, Zerina Maas, Saskia McAleer, Maeve A Penington, Anthony Rieu, Paul Syed, Samira van der Vleuten, Carine Watson, Rosemarie Fishman, Steven J Mulliken, John B Eklund, Lauri Limaye, Nisha Boon, Laurence M.[UCL] Vikkula, Miikka[UCL] (2017) The Journal of Investigative Dermatology — Vol. 137, no. 1, p. 207-216 (2017)

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