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1. • Speech

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   Detection of differentially expressed genes by scanning at multiple PMT Voltages

   Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Van der Vorst, Sébastien[UCL] Dekairelle, Anne-France[UCL] Gala, Jean-Luc[UCL] Robert, Annie[UCL] Macq, Benoît[UCL] (2008) The 16th Annual Meeting of the Belgian Statistical Society — Wepion-Namur
2. • Journal article

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   Sustained Downregulation of Vascular Smooth Muscle Acta2 After Transient Angiotensin II Infusion: A New Model of "Vascular Memory".

   Pothen, Lucie[UCL] Verdoy, Roxane[UCL] De Mulder, Delphine[UCL] Esfahani, Hrag[UCL] Farah, Charlotte[UCL] Michel, Lauriane[UCL] Dei Zotti, Flavia[UCL] Bearzatto, Bertrand[UCL] Ambroise, Jérôme[UCL] Bouzin, Caroline[UCL] Dessy, Chantal[UCL] Balligand, Jean-Luc[UCL] (2022) Frontiers in cardiovascular medicine — Vol. 9, p. 854361 [1-13] (2022)
3. • Journal article

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   First Draft Genome of the Trypanosomatid Herpetomonas muscarum ingenoplastis through MinION Oxford Nanopore Technology and Illumina Sequencing

   d'Avila-Levy, Claudia M[UCL] Bearzatto, Bertrand Ambroise, Jérôme Helaers, Raphaël Butenko, Anzhelika Yurchenko, Vyacheslav Morelli, Karina A Santos, Helena L C Brouillard, Pascal[UCL] Grellier, Philippe Gala, Jean-Luc[UCL] Vikkula, Miikka[UCL] (2020) Tropical medicine and infectious disease — Vol. 5, no. 1, p. 25 (2020)
4. • Journal article

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   Genome Sequence of a Pathogenic Vibrio cholerae O1 El Tor Strain Defective for the Entire Pathogenicity Island 1, Isolated in Eastern Democratic Republic of the Congo.

   Irenge, Leonid M[UCL] Durant, Jean-François[UCL] Ambroise, Jérôme[UCL] Mitangala, Prudence N Bearzatto, Bertrand[UCL] Gala, Jean-Luc[UCL] (2020) Microbiology resource announcements — Vol. 9, no.26, p. (2020)
5. • Journal article

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   Two Separate Clusters of SARS-CoV-2 Delta Variant Infections in a Group of 41 Students Travelling from India: An Illustration of the Need for Rigorous Testing and Quarantine.

   Van Elslande, Jan Kerckhofs, Femke Cuypers, Lize Wollants, Elke Potter, Barney Vankeerberghen, Anne Cattoir, Lien Holderbeke, Astrid Behillil, Sylvie Gorissen, Sarah Bloemen, Mandy Arnout, Jef Van Ranst, Marc Van Weyenbergh, Johan Maes, Piet Baele, Guy Vermeersch, Pieter André, Emmanuel On Behalf Of The Cog-Belgium Consortium, Ruelle, Jean[UCL] Kabamba-Mukadi, Benoît[UCL] Gala, Jean-Luc[UCL] Bearzatto, Bertrand[UCL] Ambroise, Jérôme[UCL] (2022) Viruses — Vol. 14, no.6, p. 1198 [1-10] (2022)
6. • Journal article

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   Impact of the spotted microarray preprocessing method on fold-change compression and variance stability.

   Ambroise, Jérôme[FUCAM] Bearzatto, Bertrand[UCL] Robert, Annie[UCL] Govaerts, Bernadette[UCL] Macq, Benoît[UCL] Gala, Jean-Luc[UCL] (2011) BMC Bioinformatics — Vol. 12, p. 413 (2011)
7. • Journal article

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   AMPKα1 deletion in myofibroblasts exacerbates post-myocardial infarction fibrosis by a connexin 43 mechanism

   Dufeys, Cécile[UCL] Daskalopoulos, Evangelos-Panagiotis[UCL] Castanares Zapatero, Diego[UCL] Conway, Simon J. Ginion, Audrey[UCL] Bouzin, Caroline[UCL] Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Gala, Jean-Luc[UCL] Heymans, Stephane Papageorgiou, Anna-Pia Vinckier, Stefan Cumps, Julien[UCL] Balligand, Jean-Luc[UCL] Vanhaverbeke, Maarten Sinnaeve, Peter Janssens, Stefan Bertrand, Luc[UCL] Beauloye, Christophe[UCL] Horman, Sandrine[UCL] (2021) Basic Research in Cardiology — Vol. 116, p. 10 [1-20] (2021)
8. • Journal article

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   Complete Genome Sequence of an Environmental Bacillus cereus Isolate Belonging to the Bacillus anthracis Clade.

   Irenge, Leonid[UCL] Bearzatto, Bertrand[UCL] Ambroise, Jérôme[UCL] Gala, Jean-Luc[UCL] (2020) Microbiology resource announcements — Vol. 9, no.47 (2020)
9. • Journal article

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   Dietary nanoparticles alter the composition and function of the gut microbiota in mice at dose levels relevant for human exposure.

   Perez, Laeticia[UCL] Scarcello, Eleonora[UCL] Ibouraadaten, Saloua[UCL] Yakoub, Yousof[UCL] Leinardi, Riccardo[UCL] Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Gala, Jean-Luc[UCL] Paquot, Adrien[UCL] Muccioli, Giulio[UCL] Bouzin, Caroline[UCL] Van Den Brûle, Sybille[UCL] Lison, Dominique[UCL] (2021) Food and chemical toxicology — Vol. 154, p. 112352 [1-13] (2021)
10. • Journal article

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    Gene expression in human ovarian tissue after xenografting

    Van Langendonckt, Anne[UCL] Romeu Villarroya, Lidia[UCL] Ambroise, Jérôme[UCL] Andrade Amorim, Christiani[UCL] Bearzatto, Bertrand[UCL] Gala, Jean-Luc[UCL] Donnez, Jacques[UCL] Dolmans, Marie-Madeleine[UCL] (2014) Molecular human reproduction — Vol. 20, no. 6, p. 514-525 (2014)
11. • Speech

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    A hybrid method for spotted microarray data transformation

    Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Robert, Annie[UCL] Macq, Benoît[UCL] Gala, Jean-Luc[UCL] (2011) 19th Annual Meeting Belgian Statistical Society — Hasselt
12. • Journal article

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    Genomic Characterization of Multidrug-Resistant Extended Spectrum β-Lactamase-Producing from Clinical Samples of a Tertiary Hospital in South Kivu Province, Eastern Democratic Republic of Congo.

    Irenge Mwana Wa Bene, Léonid[UCL] Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Durant, Jean-François[UCL] Bonjean, Maxime[UCL] Gala, Jean-Luc[UCL] (2023) Microorganisms — Vol. 11, no.2, p. 525 [1-17] (2023)
13. • Journal article

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    Whole-genome sequences of multidrug-resistant Escherichia coli in South-Kivu Province, Democratic Republic of Congo: characterization of phylogenomic changes, virulence and resistance genes.

    Irenge, Leonid M[UCL] Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Durant, Jean-François[UCL] Chirimwami, Raphaël B Gala, Jean-Luc[UCL] (2019) BMC infectious diseases — Vol. 19, no. 1, p. 137 [1-10] (2019)
14. • Journal article

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    Monocytic Ontogeny of Regenerated Macrophages Characterizes the Mesotheliomagenic Responses to Carbon Nanotubes

    Orsi, Micaela[UCL] Palmai-Pallag, Mihaly[UCL] Yakoub, Yousof[UCL] Ibouraadaten, Saloua[UCL] De Beukelaer, Michèle[UCL] Bouzin, Caroline[UCL] Bearzatto, Bertrand[UCL] Ambroise, Jérôme[UCL] Gala, Jean-Luc[UCL] Brusa, Davide[UCL] Lison, Dominique[UCL] Huaux, François[UCL] (2021) Frontiers in Immunology — Vol. 12, no.12, p. 12 (2021)
15. • Journal article

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    Backward compatibility of whole genome sequencing data with MLVA typing using a new MLVAtype shiny application for Vibrio cholerae.

    Ambroise, Jérôme[UCL] Irenge Mwana Wa Bene, Léonid[UCL] Durant, Jean-François[UCL] Bearzatto, Bertrand[UCL] Bwire, Godfrey Stine, O Colin Gala, Jean-Luc[UCL] (2019) PloS one — Vol. 14, no. 12, p. e0225848 [1-12] (2019)
16. • Journal article

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    On the many advantages of using the VariantExperiment class to store, exchange and analyze SARS-CoV-2 genomic data and associated metadata

    Ambroise, Jérôme[UCL] Gatto, Laurent[UCL] Hurel, Julie[UCL] Bearzatto, Bertrand[UCL] Gala, Jean-Luc[UCL] (2021) biorXiv —
17. • Journal article

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    The human dental apical papilla promotes spinal cord repair through a paracrine mechanism.

    De Berdt, Pauline Vanvarenberg, Kevin[UCL] Ucakar, Bernard[UCL] Bouzin, Caroline[UCL] Paquot, Adrien[UCL] Gratpain, Viridiane[UCL] Loriot, Axelle[UCL] Payen, Valery Bearzatto, Bertrand[UCL] Muccioli, Giulio[UCL] Gatto, Laurent[UCL] Diogenes, A des Rieux, Anne[UCL] (2022) Cellular and molecular life sciences : CMLS — Vol. 79, no.5, p. 252 (2022)
18. • Journal article

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    Nationwide quality assurance of high-throughput diagnostic molecular testing during the SARS-CoV-2 pandemic: role of the Belgian National Reference Centre.

    Janssen, Reile Cuypers, Lize Laenen, Lies Keyaerts, Els Beuselinck, Kurt Janssenswillen, Sunita Slechten, Bram Bode, Jannes Wollants, Elke Van Laethem, Kristel Rector, Annabel Bloemen, Mandy Sijmons, Anke de Schaetzen, Nathalie Capron, Arnaud Van Baelen, Kurt Pascal, Thierry Vermeiren, Céline Bureau, Fabrice Vandesompele, Jo De Smet, Pieter Uten, Wouter Malonne, Hugues Kerkhofs, Pierre De Cock, Jo Matheeussen, Veerle Verhasselt, Bruno Gillet, Laurent Detry, Gautier Bearzatto, Bertrand Degosserie, Jonathan[UCL] Henin, Coralie Pairoux, Gregor COVID-19 Genomics Belgium Consortium Maes, Piet Van Ranst, Marc Lagrou, Katrien Dequeker, Elisabeth André, Emmanuel Bogaerts, Pierre[UCL] Denis, Olivier[UCL] Huang, Te-Din[UCL] Zorzi, Giulia[UCL] Kabamba-Mukadi, Benoît[UCL] (2024) Virology journal — Vol. 21, no.1, p. 40 (2024)
19. • Journal article

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    Nationwide Harmonization Effort for Semi-Quantitative Reporting of SARS-CoV-2 PCR Test Results in Belgium.

    Cuypers, Lize Bode, Jannes Beuselinck, Kurt Laenen, Lies Dewaele, Klaas Janssen, Reile Capron, Arnaud Lafort, Yves Paridaens, Henry Bearzatto, Bertrand[UCL] Cauchie, Mathieu Huwart, Aline Degosserie, Jonathan[UCL] Fagnart, Olivier Overmeire, Yarah Rouffiange, Arlette Vandecandelaere, Ilse Deffontaine, Marine Pilate, Thomas Yin, Nicolas Micalessi, Isabel Roisin, Sandrine Moons, Veronique Reynders, Marijke Steyaert, Sophia Henin, Coralie Lazarova, Elena Obbels, Dagmar Dufrasne, François E Pirenne, Hendri Schepers, Raf Collin, Anaëlle Verhasselt, Bruno Gillet, Laurent Jonckheere, Stijn Van Lint, Philippe Van den Poel, Bea Van der Beken, Yolien Stojkovic, Violeta Garrino, Maria-Grazia Segers, Hannah Vos, Kevin Godefroid, Maaike Pede, Valerie Nollet, Friedel Claes, Vincent Verschraegen, Inge Bogaerts, Pierre[UCL] Van Gysel, Marjan Leurs, Judith Saegeman, Veroniek Soetens, Oriane Vanhee, Merijn Schiettekatte, Gilberte Huyghe, Evelyne Martens, Steven Lemmens, Ann Nailis, Heleen Laffineur, Kim Steensels, Deborah Vanlaere, Elke Gras, Jérémie Roussel, Gatien Gijbels, Koenraad Boudewijns, Michael Sion, Catherine Achtergael, Wim Maurissen, Wim Iliano, Luc Chantrenne, Marianne Vanheule, Geert Flies, Reinoud Hougardy, Nicolas Berth, Mario Verbeke, Vanessa Morent, Robin Vankeerberghen, Anne Bontems, Sébastien Kehoe, Kaat Schallier, Anneleen Ho, Giang Bafort, Kristof Raymaekers, Marijke Pypen, Yolande Heinrichs, Amelie Schuermans, Wim Cuigniez, Dominique Lali, Salah Eddine Drieghe, Stefanie Ory, Dieter Le Mercier, Marie Van Laethem, Kristel Thoelen, Inge Vandamme, Sarah Mansoor, Iqbal Vael, Carl De Sloovere, Maxime Declerck, Katrien Dequeker, Elisabeth Desmet, Stefanie Maes, Piet Lagrou, Katrien André, Emmanuel (2022) Viruses — Vol. 14, no. 6, p. 1294 [1-17] (2022)
20. • Journal article

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    Diagnostic Value of IgM and IgG Detection in COVID-19 Diagnosis by the Mobile Laboratory B-LiFE: A Massive Testing Strategy in the Piedmont Region

    Nyabi, Omar[UCL] Bentahir, Mostafa[UCL] Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Chibani, Nawfal[UCL] Smits, Benjamin[UCL] Durant, Jean-François[UCL] Vybornov, Aleksandr[UCL] Thellin, Olivier El Moualij, Benaissa Gala, Jean-Luc[UCL] (2021) International journal of environmental research and public health — Vol. 18, no. 7, p. 3372 [1-10] (2021)
21. • Journal article

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    Genomic analysis of pathogenic isolates of Vibrio cholerae from eastern Democratic Republic of the Congo (2014-2017).

    Irenge Mwana Wa Bene, Léonid[UCL] Ambroise, Jérôme[UCL] Mitangala, Prudence N Bearzatto, Bertrand[UCL] Kabangwa, Raphaël K S Durant, Jean-François[UCL] Gala, Jean-Luc[UCL] (2020) PLoS neglected tropical diseases — Vol. 14, no. 4, p. e0007642 [1-16] (2020)
22. • Journal article

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    At the Gate of Mutualism: Identification of Genomic Traits Predisposing to Insect-Bacterial Symbiosis in Pathogenic Strains of the Aphid Symbiont Serratia symbiotica

    Renoz, François[UCL] Foray, Vincent Ambroise, Jérôme[UCL] Baa-Puyoulet, Patrice Bearzatto, Bertrand[UCL] Lima Mendez, Gipsi[UCL] Grigorescu, Alina S. Mahillon, Jacques[UCL] Mardulyn, Patrick Gala, Jean-Luc[UCL] Calevro, Federica Hance, Thierry[UCL] (2021) Frontiers in Cellular and Infection Microbiology — Vol. 11, no.660007, p. 1 (2021)
23. • Journal article

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    Combining multiple laser scans of spotted microarrays by means of a two-way ANOVA model

    Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Robert, Annie[UCL] Macq, Benoît[UCL] Gala, Jean-Luc[UCL] (2012) Statistical Applications in Genetics and Molecular Biology — Vol. 11, no. 3, p. Article 8 [1-20] (2012)
24. • Journal article

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    Heterogeneity of synovial molecular patterns in patients with arthritis

    Lauwerys, Bernard[UCL] Hernández-Lobato, Daniel Gramme, Pierre Ducreux, Julie[UCL] Dessy, Adrien[UCL] Focant, Isabelle[UCL] Ambroise, Jérôme[UCL] Bearzatto, Bertrand[UCL] Nzeusseu Toukap, Adrien[UCL] Van den Eynde, Benoît[UCL] Elewaut, Dirk Gala, Jean-Luc[UCL] Durez, Patrick[UCL] Houssiau, Frédéric[UCL] Helleputte, Thibault Dupont, Pierre[UCL] (2015) PLoS One — Vol. 10, no. 4, p. e0122104 [1-18] (2015)
25. • Journal article

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    Genomic characterisation of extended-spectrum β-lactamase-producing multidrug-resistant Escherichia coli in Rabat, Morocco.

    Ambroise, Jérôme[UCL] Benaissa, Elmostafa Irenge Mwana Wa Bene, Léonid[UCL] Belouad, El Mehdi Bearzatto, Bertrand[UCL] Durant, Jean-François[UCL] Badir, Jamal[UCL] Elouennass, Mostafa Gala, Jean-Luc[UCL] (2021) Journal of global antimicrobial resistance — Vol. 26, no. 1, p. 335-341 (2021)

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