Inácio, João
[School of Pharmacy and Biomolecular Sciences, University of Brighton, Brighton, UK]
Daniel, Heide-Marie
[UCL]
The mycological community of humans is subject to numerous interactions, for example, among cohabitating fungi, other microbes, their hosts, as well as biotic and abiotic factors the host is exposed to. Yeasts form an important part of this community. While human-colonising yeasts receive high attention as opportunistic pathogens, they are less recognised as commensals. The ecology of the yeast-human relationship bears many open questions. This includes the potential effects of colonising yeasts on humans. Negative effects may be linked to an imbalance of total microbiota, and literature often associated the state of health with high mycological diversity. The mycological communities are less well studied compared to the bacterial components, and a systematic evaluation of the fungal diversity that colonises humans is still difficult. Literature suggests that the same yeast species that are known as frequent opportunists (e.g. Candida albicans) may also play beneficial roles, while dominantly as beneficial recognised yeasts (e.g. Saccharomyces cerevisiae) may turn infective in states of immune impairment. The yet incomplete list of factors that influence yeast diversity in humans includes age, diet, body site, medical treatments, bacterial community composition, and immune status. Further studies of this area are hoped to extend the knowledge on healthy yeast diversity and the interactions in which yeasts participate.


- Anderson H. W., Yeast-Like Fungi of the Human Intestinal Tract, 10.1093/infdis/21.4.341
- Angebault Cécile, Djossou Félix, Abélanet Sophie, Permal Emmanuelle, Ben Soltana Mouna, Diancourt Laure, Bouchier Christiane, Woerther Paul-Louis, Catzeflis François, Andremont Antoine, d'Enfert Christophe, Bougnoux Marie-Elisabeth, Candida albicans Is Not Always the Preferential Yeast Colonizing Humans: A Study in Wayampi Amerindians, 10.1093/infdis/jit389
- Arumugam Manimozhiyan, Raes Jeroen, Pelletier Eric, Le Paslier Denis, Yamada Takuji, Mende Daniel R., Fernandes Gabriel R., Tap Julien, Bruls Thomas, Batto Jean-Michel, Bertalan Marcelo, Borruel Natalia, Casellas Francesc, Fernandez Leyden, Gautier Laurent, Hansen Torben, Hattori Masahira, Hayashi Tetsuya, Kleerebezem Michiel, Kurokawa Ken, Leclerc Marion, Levenez Florence, Manichanh Chaysavanh, Nielsen H. Bjørn, Nielsen Trine, Pons Nicolas, Poulain Julie, Qin Junjie, Sicheritz-Ponten Thomas, Tims Sebastian, Torrents David, Ugarte Edgardo, Zoetendal Erwin G., Wang Jun, Guarner Francisco, Pedersen Oluf, de Vos Willem M., Brunak Søren, Doré Joel, Antolín María, Artiguenave François, Blottiere Hervé M., Almeida Mathieu, Brechot Christian, Cara Carlos, Chervaux Christian, Cultrone Antonella, Delorme Christine, Denariaz Gérard, Dervyn Rozenn, Foerstner Konrad U., Friss Carsten, van de Guchte Maarten, Guedon Eric, Haimet Florence, Huber Wolfgang, van Hylckama-Vlieg Johan, Jamet Alexandre, Juste Catherine, Kaci Ghalia, Knol Jan, Lakhdari Omar, Layec Severine, Le Roux Karine, Maguin Emmanuelle, Mérieux Alexandre, Melo Minardi Raquel, M'rini Christine, Muller Jean, Oozeer Raish, Parkhill Julian, Renault Pierre, Rescigno Maria, Sanchez Nicolas, Sunagawa Shinichi, Torrejon Antonio, Turner Keith, Vandemeulebrouck Gaetana, Varela Encarna, Winogradsky Yohanan, Zeller Georg, Weissenbach Jean, Ehrlich S. Dusko, Bork Peer, Enterotypes of the human gut microbiome, 10.1038/nature09944
- ASHFORD BAILEY K., RELATION OF THE GENUS "MONILIA" TO CERTAIN FERMENTATIVE CONDITIONS OF THE INTESTINAL TRACT IN PORTO RICO, 10.1001/jama.1915.02570490009004
- Benadé Eliska, Stone Wendy, Mouton Marnel, Postma Ferdinand, Wilsenach Jac, Botha Alfred, Binary Interactions of Antagonistic Bacteria with Candida albicans Under Aerobic and Anaerobic Conditions, 10.1007/s00248-015-0706-4
- Bittinger Kyle, Charlson Emily S, Loy Elizabeth, Shirley David J, Haas Andrew R, Laughlin Alice, Yi Yanjie, Wu Gary D, Lewis James D, Frank Ian, Cantu Edward, Diamond Joshua M, Christie Jason D, Collman Ronald G, Bushman Frederic D, Improved characterization of medically relevant fungi in the human respiratory tract using next-generation sequencing, 10.1186/s13059-014-0487-y
- Bradford L. Latéy, Ravel Jacques, The vaginal mycobiome: A contemporary perspective on fungi in women's health and diseases, 10.1080/21505594.2016.1237332
- Casadevall Arturo, Determinants of virulence in the pathogenic fungi, 10.1016/j.fbr.2007.02.007
- Charlson Emily S., Diamond Joshua M., Bittinger Kyle, Fitzgerald Ayannah S., Yadav Anjana, Haas Andrew R., Bushman Frederic D., Collman Ronald G., Lung-enriched Organisms and Aberrant Bacterial and Fungal Respiratory Microbiota after Lung Transplant, 10.1164/rccm.201204-0693oc
- Chen Yu, Chen Zhenjing, Guo Renyong, Chen Nan, Lu Haifeng, Huang Shuai, Wang Jie, Li Lanjuan, Correlation between gastrointestinal fungi and varying degrees of chronic hepatitis B virus infection, 10.1016/j.diagmicrobio.2010.04.005
- Clavaud Cécile, Jourdain Roland, Bar-Hen Avner, Tichit Magali, Bouchier Christiane, Pouradier Florence, El Rawadi Charles, Guillot Jacques, Ménard-Szczebara Florence, Breton Lionel, Latgé Jean-Paul, Mouyna Isabelle, Correction: Dandruff Is Associated with Disequilibrium in the Proportion of the Major Bacterial and Fungal Populations Colonizing the Scalp, 10.1371/annotation/bcff4a59-10b7-442a-8181-12fa69209e57
- Clemente Jose C., Ursell Luke K., Parfrey Laura Wegener, Knight Rob, The Impact of the Gut Microbiota on Human Health: An Integrative View, 10.1016/j.cell.2012.01.035
- Cogen A.L., Nizet V., Gallo R.L., Skin microbiota: a source of disease or defence? : Skin microbiota, 10.1111/j.1365-2133.2008.08437.x
- Costello E. K., Lauber C. L., Hamady M., Fierer N., Gordon J. I., Knight R., Bacterial Community Variation in Human Body Habitats Across Space and Time, 10.1126/science.1177486
- Cui Lijia, Morris Alison, Ghedin Elodie, The human mycobiome in health and disease, 10.1186/gm467
- Cui Lijia, Lucht Lorrie, Tipton Laura, Rogers Matthew B., Fitch Adam, Kessinger Cathy, Camp Danielle, Kingsley Lawrence, Leo Nicolas, Greenblatt Ruth M., Fong Serena, Stone Stephen, Dermand John C., Kleerup Eric C., Huang Laurence, Morris Alison, Ghedin Elodie, Topographic Diversity of the Respiratory Tract Mycobiome and Alteration in HIV and Lung Disease, 10.1164/rccm.201409-1583oc
- Daniel Heide-Marie, Lachance Marc-André, Kurtzman Cletus P., On the reclassification of species assigned to Candida and other anamorphic ascomycetous yeast genera based on phylogenetic circumscription, 10.1007/s10482-014-0170-z
- David Lawrence A., Maurice Corinne F., Carmody Rachel N., Gootenberg David B., Button Julie E., Wolfe Benjamin E., Ling Alisha V., Devlin A. Sloan, Varma Yug, Fischbach Michael A., Biddinger Sudha B., Dutton Rachel J., Turnbaugh Peter J., Diet rapidly and reproducibly alters the human gut microbiome, 10.1038/nature12820
- De Sordi Luisa, Mühlschlegel Fritz A., Quorum sensing and fungal-bacterial interactions inCandida albicans: a communicative network regulating microbial coexistence and virulence, 10.1111/j.1567-1364.2009.00573.x
- Delhaes Laurence, Monchy Sébastien, Fréalle Emilie, Hubans Christine, Salleron Julia, Leroy Sylvie, Prevotat Anne, Wallet Frédérick, Wallaert Benoit, Dei-Cas Eduardo, Sime-Ngando Telesphore, Chabé Magali, Viscogliosi Eric, The Airway Microbiota in Cystic Fibrosis: A Complex Fungal and Bacterial Community—Implications for Therapeutic Management, 10.1371/journal.pone.0036313
- d’Enfert Christophe, Hidden killers: persistence of opportunistic fungal pathogens in the human host, 10.1016/j.mib.2009.05.008
- Diaz PI, Strausbaugh LD, Dongari-Bagtzoglou A (2014) Fungal-bacterial interactions and their relevance to oral health: linking the clinic and the bench. Front Cell Infect Microbiol 4:101
- Diaz Patricia I., Hong Bo-Young, Dupuy Amanda K., Strausbaugh Linda D., Mining the oral mycobiome: Methods, components, and meaning, 10.1080/21505594.2016.1252015
- Dickson Robert P., Erb-Downward John R., Martinez Fernando J., Huffnagle Gary B., The Microbiome and the Respiratory Tract, 10.1146/annurev-physiol-021115-105238
- Drell Tiina, Lillsaar Triin, Tummeleht Lea, Simm Jaak, Aaspõllu Anu, Väin Edda, Saarma Ivo, Salumets Andres, Donders Gilbert G. G., Metsis Madis, Characterization of the Vaginal Micro- and Mycobiome in Asymptomatic Reproductive-Age Estonian Women, 10.1371/journal.pone.0054379
- Dupuy Amanda K., David Marika S., Li Lu, Heider Thomas N., Peterson Jason D., Montano Elizabeth A., Dongari-Bagtzoglou Anna, Diaz Patricia I., Strausbaugh Linda D., Redefining the Human Oral Mycobiome with Improved Practices in Amplicon-based Taxonomy: Discovery of Malassezia as a Prominent Commensal, 10.1371/journal.pone.0090899
- Enache-Angoulvant A., Hennequin C., Invasive Saccharomyces Infection: A Comprehensive Review, 10.1086/497832
- Erb Downward John R., Falkowski Nicole R., Mason Katie L., Muraglia Ryan, Huffnagle Gary B., Modulation of Post-Antibiotic Bacterial Community Reassembly and Host Response by Candida albicans, 10.1038/srep02191
- Erturk-Hasdemir Deniz, Kasper Dennis L, Resident commensals shaping immunity, 10.1016/j.coi.2013.06.001
- Falsetta M. L., Klein M. I., Colonne P. M., Scott-Anne K., Gregoire S., Pai C.-H., Gonzalez-Begne M., Watson G., Krysan D. J., Bowen W. H., Koo H., Symbiotic Relationship between Streptococcus mutans and Candida albicans Synergizes Virulence of Plaque Biofilms In Vivo, 10.1128/iai.00087-14
- Findley Keisha, Oh Julia, Yang Joy, Conlan Sean, Deming Clayton, Meyer Jennifer A., Schoenfeld Deborah, Nomicos Effie, Park Morgan, Becker Jesse, Benjamin Betty, Blakesley Robert, Bouffard Gerry, Brooks Shelise, Coleman Holly, Dekhtyar Mila, Gregory Michael, Guan Xiaobin, Gupta Jyoti, Han Joel, Hargrove April, Ho Shi-ling, Johnson Taccara, Legaspi Richelle, Lovett Sean, Maduro Quino, Masiello Cathy, Maskeri Baishali, McDowell Jenny, Montemayor Casandra, Mullikin James, Park Morgan, Riebow Nancy, Schandler Karen, Schmidt Brian, Sison Christina, Stantripop Mal, Thomas James, Thomas Pam, Vemulapalli Meg, Young Alice, Kong Heidi H., Segre Julia A., Topographic diversity of fungal and bacterial communities in human skin, 10.1038/nature12171
- Gaitanis G., Magiatis P., Hantschke M., Bassukas I. D., Velegraki A., The Malassezia Genus in Skin and Systemic Diseases, 10.1128/cmr.00021-11
- Ghannoum Mahmoud A., Jurevic Richard J., Mukherjee Pranab K., Cui Fan, Sikaroodi Masoumeh, Naqvi Ammar, Gillevet Patrick M., Characterization of the Oral Fungal Microbiome (Mycobiome) in Healthy Individuals, 10.1371/journal.ppat.1000713
- Gill S. R., Pop M., DeBoy R. T., Eckburg P. B., Turnbaugh P. J., Samuel B. S., Gordon J. I., Relman D. A., Fraser-Liggett C. M., Nelson K. E., Metagenomic Analysis of the Human Distal Gut Microbiome, 10.1126/science.1124234
- Gouba N., Drancourt M., Digestive tract mycobiota: A source of infection, 10.1016/j.medmal.2015.01.007
- Gouba Nina, Raoult Didier, Drancourt Michel, Eukaryote Culturomics of the Gut Reveals New Species, 10.1371/journal.pone.0106994
- Guo Renyong, Zheng Nengneng, Lu Haifeng, Yin Hongfang, Yao Jinmei, Chen Yu, Increased Diversity of Fungal Flora in the Vagina of Patients with Recurrent Vaginal Candidiasis and Allergic Rhinitis, 10.1007/s00248-012-0084-0
- Hallen-Adams Heather E., Suhr Mallory J., Fungi in the healthy human gastrointestinal tract, 10.1080/21505594.2016.1247140
- Hallen-Adams Heather E., Kachman Stephen D., Kim Jaehyoung, Legge Ryan M., Martínez Inés, Fungi inhabiting the healthy human gastrointestinal tract: a diverse and dynamic community, 10.1016/j.funeco.2015.01.006
- Harding C. R., Moore A. E., Rogers S. J., Meldrum H., Scott A. E., McGlone F. P., Dandruff: a condition characterized by decreased levels of intercellular lipids in scalp stratum corneum and impaired barrier function, 10.1007/s00403-002-0323-1
- Hatoum Rima, Labrie Steve, Fliss Ismail, Antimicrobial and Probiotic Properties of Yeasts: From Fundamental to Novel Applications, 10.3389/fmicb.2012.00421
- Hoffmann C, Dollive S, Grunberg S, Chen J, Li H, Wu GD, Lewis JD, Bushman FD (2013) Archaea and fungi of the human gut microbiome: correlations with diet and bacterial residents. PLoS One 8:e66019
- Hogan Deborah A., Vik Åshild, Kolter Roberto, A Pseudomonas aeruginosa quorum-sensing molecule influences Candida albicans morphology : Pseudomonas inhibition of C. albicans filamentation, 10.1111/j.1365-2958.2004.04349.x
- Huffnagle Gary B., Noverr Mairi C., The emerging world of the fungal microbiome, 10.1016/j.tim.2013.04.002
- Iliev I. D., Funari V. A., Taylor K. D., Nguyen Q., Reyes C. N., Strom S. P., Brown J., Becker C. A., Fleshner P. R., Dubinsky M., Rotter J. I., Wang H. L., McGovern D. P. B., Brown G. D., Underhill D. M., Interactions Between Commensal Fungi and the C-Type Lectin Receptor Dectin-1 Influence Colitis, 10.1126/science.1221789
- Imabayashi Yumi, Moriyama Masafumi, Takeshita Toru, Ieda Shinsuke, Hayashida Jun-Nosuke, Tanaka Akihiko, Maehara Takashi, Furukawa Sachiko, Ohta Miho, Kubota Keigo, Yamauchi Masaki, Ishiguro Noriko, Yamashita Yoshihisa, Nakamura Seiji, Molecular analysis of fungal populations in patients with oral candidiasis using next-generation sequencing, 10.1038/srep28110
- Jo Jay-Hyun, Deming Clay, Kennedy Elizabeth A., Conlan Sean, Polley Eric C., Ng Weng-lan, Segre Julia A., Kong Heidi H., Diverse Human Skin Fungal Communities in Children Converge in Adulthood, 10.1016/j.jid.2016.05.130
- Jo Jay-Hyun, Kennedy Elizabeth A., Kong Heidi H., Topographical and physiological differences of the skin mycobiome in health and disease, 10.1080/21505594.2016.1249093
- Jung Won Hee, Croll Daniel, Cho Jae Hoon, Kim Yu Ri, Lee Yang Won, Analysis of the nasal vestibule mycobiome in patients with allergic rhinitis, 10.1111/myc.12296
- Kalan L, Loesche M, Hodkinson BP, Heilmann K, Ruthel G, Gardner SE, Grice EA (2016) Redefining the chronic-wound microbiome: fungal communities are prevalent, dynamic, and associated with delayed healing. MBio 7:e01058-16
- Kennedy Michael J., Volz Paul A., Effect of various antibiotics on gastrointestinal colonization and dissemination byCandida albicans, 10.1080/00362178585380391
- Kerr Jonathan R., Bacterial inhibition of fungal growth and pathogenicity, 10.1080/089106099435709
- Kim Yun-Gi, Udayanga Kankanam Gamage Sanath, Totsuka Naoya, Weinberg Jason B., Núñez Gabriel, Shibuya Akira, Gut Dysbiosis Promotes M2 Macrophage Polarization and Allergic Airway Inflammation via Fungi-Induced PGE2, 10.1016/j.chom.2013.12.010
- Kim SH, Clark ST, Surendra A, Copeland JK, Wang PW, Ammar R, Collins C, Tullis DE, Nislow C, Hwang DM, Guttman DS, Cowen LE (2015) Global analysis of the fungal microbiome in cystic fibrosis patients reveals loss of function of the transcriptional repressor Nrg1 as a mechanism of pathogen adaptation. PLoS Pathog 11:e1005308
- Klotz Stephen A., Gaur Nand K., De Armond Richard, Sheppard Donald, Khardori Nancy, Edwards John E., Lipke Peter N., El-Azizi Mohamed, Candida albicansAls proteins mediate aggregation with bacteria and yeasts, 10.1080/13693780701299333
- Kostoulias Xenia, Murray Gerald L., Cerqueira Gustavo M., Kong Jason B., Bantun Farkad, Mylonakis Eleftherios, Khoo Chen Ai, Peleg Anton Y., Impact of a Cross-Kingdom Signaling Molecule of Candida albicans on Acinetobacter baumannii Physiology, 10.1128/aac.01540-15
- Kramer Rolf, Sauer-Heilborn Annette, Welte Tobias, Guzman Carlos A., Abraham Wolf-Rainer, Höfle Manfred G., Cohort Study of Airway Mycobiome in Adult Cystic Fibrosis Patients: Differences in Community Structure between Fungi and Bacteria Reveal Predominance of Transient Fungal Elements, 10.1128/jcm.01094-15
- Krause R, Halwachs B, Thallinger GG, Klymiuk I, Gorkiewicz G, Hoenigl M, Prattes J, Valentin T, Heidrich K, Buzina W, Salzer HJ, Rabensteiner J, Prüller F, Raggam RB, Meinitzer A, Moissl-Eichinger C, Högenauer C, Quehenberger F, Kashofer K, Zollner-Schwetz I (2016) Characterisation of Candida within the mycobiome/microbiome of the lower respiratory tract of ICU patients. PLoS One 11:e0155033
- Krause Robert, Moissl-Eichinger Christine, Halwachs Bettina, Gorkiewicz Gregor, Berg Gabriele, Valentin Thomas, Prattes Jürgen, Högenauer Christoph, Zollner-Schwetz Ines, Mycobiome in the Lower Respiratory Tract – A Clinical Perspective, 10.3389/fmicb.2016.02169
- Leung Marcus H. Y., Chan Kelvin C. K., Lee Patrick K. H., Skin fungal community and its correlation with bacterial community of urban Chinese individuals, 10.1186/s40168-016-0192-z
- Liguori Giuseppina, Lamas Bruno, Richard Mathias L., Brandi Giovanni, da Costa Gregory, Hoffmann Thomas W., Di Simone Massimo Pierluigi, Calabrese Carlo, Poggioli Gilberto, Langella Philippe, Campieri Massimo, Sokol Harry, Fungal Dysbiosis in Mucosa-associated Microbiota of Crohn’s Disease Patients, 10.1093/ecco-jcc/jjv209
- Lindsay Allia K., Hogan Deborah A., Candida albicans: Molecular interactions with Pseudomonas aeruginosa and Staphylococcus aureus, 10.1016/j.fbr.2014.10.002
- Liu X.-Z., Wang Q.-M., Göker M., Groenewald M., Kachalkin A.V., Lumbsch H.T., Millanes A.M., Wedin M., Yurkov A.M., Boekhout T., Bai F.-Y., Towards an integrated phylogenetic classification of the Tremellomycetes, 10.1016/j.simyco.2015.12.001
- Martin Isabella W., Tonner Rita, Trivedi Julie, Miller Heather, Lee Richard, Liang Xinglun, Rotello Leo, Isenbergh Elena, Anderson Jennifer, Perl Trish, Zhang Sean X., Saccharomyces boulardii probiotic-associated fungemia: questioning the safety of this preventive probiotic's use, 10.1016/j.diagmicrobio.2016.12.004
- Mason K. L., Erb Downward J. R., Mason K. D., Falkowski N. R., Eaton K. A., Kao J. Y., Young V. B., Huffnagle G. B., Candida albicans and Bacterial Microbiota Interactions in the Cecum during Recolonization following Broad-Spectrum Antibiotic Therapy, 10.1128/iai.00449-12
- McFarland Lynne V, Systematic review and meta-analysis ofSaccharomyces boulardiiin adult patients, 10.3748/wjg.v16.i18.2202
- Miranda L.N., van der Heijden I.M., Costa S.F., Sousa A.P.I., Sienra R.A., Gobara S., Santos C.R., Lobo R.D., Pessoa V.P., Levin A.S., Candida colonisation as a source for candidaemia, 10.1016/j.jhin.2009.02.009
- Morales D. K., Grahl N., Okegbe C., Dietrich L. E. P., Jacobs N. J., Hogan D. A., Control of Candida albicans Metabolism and Biofilm Formation by Pseudomonas aeruginosa Phenazines, 10.1128/mbio.00526-12
- Moyes David L., Naglik Julian R., The Mycobiome: Influencing IBD Severity, 10.1016/j.chom.2012.05.009
- Mukherjee Pranab K., Chandra Jyotsna, Retuerto Mauricio, Sikaroodi Masoumeh, Brown Robert E., Jurevic Richard, Salata Robert A., Lederman Michael M., Gillevet Patrick M., Ghannoum Mahmoud A., Oral Mycobiome Analysis of HIV-Infected Patients: Identification of Pichia as an Antagonist of Opportunistic Fungi, 10.1371/journal.ppat.1003996
- Mukherjee Pranab K., Sendid Boualem, Hoarau Gautier, Colombel Jean-Frédéric, Poulain Daniel, Ghannoum Mahmoud A., Mycobiota in gastrointestinal diseases, 10.1038/nrgastro.2014.188
- Murdoch Travis B., Xu Wei, Stempak Joanne M., Landers Carol, Targan Stephan R., Rotter Jerome I., Silverberg Mark S., Pattern recognition receptor and autophagy gene variants are associated with development of antimicrobial antibodies in Crohnʼs disease : , 10.1002/ibd.22884
- Neville B. Anne, d'Enfert Christophe, Bougnoux Marie-Elisabeth, Candida albicanscommensalism in the gastrointestinal tract, 10.1093/femsyr/fov081
- Nguyen LD, Viscogliosi E, Delhaes L (2015) The lung mycobiome: an emerging field of the human respiratory microbiome. Front Microbiol 6:89
- Nilsson R. Henrik, Ryberg Martin, Kristiansson Erik, Abarenkov Kessy, Larsson Karl-Henrik, Kõljalg Urmas, Taxonomic Reliability of DNA Sequences in Public Sequence Databases: A Fungal Perspective, 10.1371/journal.pone.0000059
- Noverr M. C., Huffnagle G. B., Regulation of Candida albicans Morphogenesis by Fatty Acid Metabolites, 10.1128/iai.72.11.6206-6210.2004
- Noverr M. C., Phare S. M., Toews G. B., Coffey M. J., Huffnagle G. B., Pathogenic Yeasts Cryptococcus neoformans and Candida albicans Produce Immunomodulatory Prostaglandins, 10.1128/iai.69.5.2957-2963.2001
- Noverr M. C., Noggle R. M., Toews G. B., Huffnagle G. B., Role of Antibiotics and Fungal Microbiota in Driving Pulmonary Allergic Responses, 10.1128/iai.72.9.4996-5003.2004
- Noverr M. C., Falkowski N. R., McDonald R. A., McKenzie A. N., Huffnagle G. B., Development of Allergic Airway Disease in Mice following Antibiotic Therapy and Fungal Microbiota Increase: Role of Host Genetics, Antigen, and Interleukin-13, 10.1128/iai.73.1.30-38.2005
- Nucci Marcio, Anaissie Elias, Revisiting the Source of Candidemia: Skin or Gut?, 10.1086/323759
- Park HK, Ha MH, Park SG, Kim MN, Kim BJ, Kim W (2012) Characterization of the fungal microbiota (mycobiome) in healthy and dandruff-afflicted human scalps. PLoS One 7:e32847
- Peleg A. Y., Tampakakis E., Fuchs B. B., Eliopoulos G. M., Moellering R. C., Mylonakis E., Prokaryote-eukaryote interactions identified by using Caenorhabditis elegans, 10.1073/pnas.0805048105
- Peleg Anton Y., Hogan Deborah A., Mylonakis Eleftherios, Medically important bacterial–fungal interactions, 10.1038/nrmicro2313
- Peters B. M., Palmer G. E., Nash A. K., Lilly E. A., Fidel P. L., Noverr M. C., Deepe G. S., Fungal Morphogenetic Pathways Are Required for the Hallmark Inflammatory Response during Candida albicans Vaginitis, 10.1128/iai.01417-13
- Pfaller Michael, Neofytos Dionissios, Diekema Daniel, Azie Nkechi, Meier-Kriesche Herwig-Ulf, Quan Shun-Ping, Horn David, Epidemiology and outcomes of candidemia in 3648 patients: data from the Prospective Antifungal Therapy (PATH Alliance®) registry, 2004–2008, 10.1016/j.diagmicrobio.2012.10.003
- Prohic Asja, Ozegovic Ladislav, Malassezia species isolated from lesional and non-lesional skin in patients with pityriasis versicolor, 10.1111/j.1439-0507.2006.01310.x
- Richard Mathias L., Lamas Bruno, Liguori Giuseppina, Hoffmann Thomas W., Sokol Harry, Gut Fungal Microbiota : The Yin and Yang of Inflammatory Bowel Disease, 10.1097/mib.0000000000000261
- Roetzer Andreas, Gabaldón Toni, Schüller Christoph, From Saccharomyces cerevisiae to Candida glabrata in a few easy steps: important adaptations for an opportunistic pathogen : Candida glabrata stress response, 10.1111/j.1574-6968.2010.02102.x
- Roth R R, James W D, Microbial Ecology of the Skin, 10.1146/annurev.mi.42.100188.002301
- Samuelsen Anne Berit C., Schrezenmeir Jürgen, Knutsen Svein H., Effects of orally administered yeast-derived beta-glucans: A review, 10.1002/mnfr.201300338
- Saunte DM, Tarazooie B, Arendrup MC, de Hoog GS (2012) Black yeast-like fungi in skin and nail: it probably matters. Mycoses 55:161–167
- Schommer Nina N., Gallo Richard L., Structure and function of the human skin microbiome, 10.1016/j.tim.2013.10.001
- Seibold F., Stich O., Hufnagl R., Kamil S., Scheurlen M., Anti-Saccharomyces cerevisiae Antibodies in Inflammatory Bowel Disease: a Family Study, 10.1080/003655201750065960
- Shirtliff Mark E., Peters Brian M., Jabra-Rizk Mary Ann, Cross-kingdom interactions:Candida albicansand bacteria, 10.1111/j.1574-6968.2009.01668.x
- Sobel Jack D, Vulvovaginal candidosis, 10.1016/s0140-6736(07)60917-9
- Sokol Harry, Leducq Valentin, Aschard Hugues, Pham Hang-Phuong, Jegou Sarah, Landman Cecilia, Cohen David, Liguori Giuseppina, Bourrier Anne, Nion-Larmurier Isabelle, Cosnes Jacques, Seksik Philippe, Langella Philippe, Skurnik David, Richard Mathias L, Beaugerie Laurent, Fungal microbiota dysbiosis in IBD, 10.1136/gutjnl-2015-310746
- Standaert–Vitse Annie, Jouault Thierry, Vandewalle Peggy, Mille Céline, Seddik Mimouna, Sendid Boualem, Mallet Jean–Maurice, Colombel Jean–Frédéric, Poulain Daniel, Candida albicans Is an Immunogen for Anti–Saccharomyces cerevisiae Antibody Markers of Crohn’s Disease, 10.1053/j.gastro.2006.02.009
- Stier Heike, Ebbeskotte Veronika, Gruenwald Joerg, Immune-modulatory effects of dietary Yeast Beta-1,3/1,6-D-glucan, 10.1186/1475-2891-13-38
- Strati Francesco, Di Paola Monica, Stefanini Irene, Albanese Davide, Rizzetto Lisa, Lionetti Paolo, Calabrò Antonio, Jousson Olivier, Donati Claudio, Cavalieri Duccio, De Filippo Carlotta, Age and Gender Affect the Composition of Fungal Population of the Human Gastrointestinal Tract, 10.3389/fmicb.2016.01227
- Sugita Takashi, Yamazaki Takashi, Makimura Koichi, Cho Otomi, Yamada Shin, Ohshima Hiroshi, Mukai Chiaki, Comprehensive analysis of the skin fungal microbiota of astronauts during a half-year stay at the International Space Station, 10.1093/mmy/myv121
- Suhr M. J., Hallen-Adams H. E., The human gut mycobiome: pitfalls and potentials--a mycologists perspective, 10.3852/15-147
- Suhr M.J., Banjara N., Hallen-Adams H.E., Sequence-based methods for detecting and evaluating the human gut mycobiome, 10.1111/lam.12539
- Tang Jie, Iliev Iliyan D., Brown Jordan, Underhill David M., Funari Vincent A., Mycobiome: Approaches to analysis of intestinal fungi, 10.1016/j.jim.2015.04.004
- Tati Swetha, Davidow Peter, McCall Andrew, Hwang-Wong Elizabeth, Rojas Isolde G., Cormack Brendan, Edgerton Mira, Candida glabrata Binding to Candida albicans Hyphae Enables Its Development in Oropharyngeal Candidiasis, 10.1371/journal.ppat.1005522
- Tipton Laura, Ghedin Elodie, Morris Alison, The lung mycobiome in the next-generation sequencing era, 10.1080/21505594.2016.1235671
- Tremaroli Valentina, Bäckhed Fredrik, Functional interactions between the gut microbiota and host metabolism, 10.1038/nature11552
- Tyc Katarzyna M., Herwald Sanna E., Hogan Jennifer A., Pierce Jessica V., Klipp Edda, Kumamoto Carol A., The game theory of Candida albicans colonization dynamics reveals host status-responsive gene expression, 10.1186/s12918-016-0268-1
- Underhill DM, Iliev ID (2013) Fungal mycobiome as probiotics, diagnostics and therapeutics. International Application No. PCT/US2013/038466
- Underhill David M., Iliev Iliyan D., The mycobiota: interactions between commensal fungi and the host immune system, 10.1038/nri3684
- Underhill David M., Pearlman Eric, Immune Interactions with Pathogenic and Commensal Fungi: A Two-Way Street, 10.1016/j.immuni.2015.10.023
- van Woerden Hugo Cornelis, Gregory Clive, Brown Richard, Marchesi Julian Roberto, Hoogendoorn Bastiaan, Matthews Ian Price, Differences in fungi present in induced sputum samples from asthma patients and non-atopic controls: a community based case control study, 10.1186/1471-2334-13-69
- Wade William G., The oral microbiome in health and disease, 10.1016/j.phrs.2012.11.006
- Wang Z. K., Yang Y. S., Stefka A. T., Sun G., Peng L. H., Review article: fungal microbiota and digestive diseases, 10.1111/apt.12665
- Wheeler Matthew L., Limon Jose J., Bar Agnieszka S., Leal Christian A., Gargus Matthew, Tang Jie, Brown Jordan, Funari Vincent A., Wang Hanlin L., Crother Timothy R., Arditi Moshe, Underhill David M., Iliev Iliyan D., Immunological Consequences of Intestinal Fungal Dysbiosis, 10.1016/j.chom.2016.05.003
- White Bryan A., Creedon Douglas J., Nelson Karen E., Wilson Brenda A., The vaginal microbiome in health and disease, 10.1016/j.tem.2011.06.001
- World Health Organisation (2017)
http://www.who.int/medicines/publications/WHO-PPL-Short_Summary_25Feb-ET_NM_WHO.pdf?ua=1
- Xu H., Sobue T., Thompson A., Xie Z., Poon K., Ricker A., Cervantes J., Diaz P. I., Dongari-Bagtzoglou A., Streptococcal co-infection augmentsCandidapathogenicity by amplifying the mucosal inflammatory response : Candida-streptococcal synergy in oral thrush, 10.1111/cmi.12216
- Young G., Resca H.G., Sullivan M.T., The Yeasts of the Normal Mouth and Their Relation to Salivary Acidity, 10.1177/00220345510300031901
Bibliographic reference |
Inácio, João ; Daniel, Heide-Marie. Commensalism: The Case of the Human Zymobiome. In: Pietro Buzzini, Marc-André Lachance, Andrey Yurkov Edts., Yeasts in Natural Ecosystems : Ecology, Springer 2017 2017, p. 211-228 |
Permanent URL |
http://hdl.handle.net/2078.1/188184 |