Naithani, J.
de Brye, B.
Buyze, E.
Vyverman, W.
Legat, V.
Deleersnijder, Eric
[UCL]
This paper presents the formulation, structure, and governing equations of an ecosystem model developed for the Scheldt estuary and the tidal river network. The model has twelve state variables: nitrate, ammonium, phosphate, dissolved silica, freshwater and marine phytoplankton (chlorophytes and diatoms), freshwater zooplankton (ciliates, rotifers, and copepods), and benthic detritus. The ecological model is coupled to the 1-D tidal resolving version of the Second-generation Louvain-la-neuve ice-ocean Model (SLIM) (http://www.climate.be/SLIM). The model successfully simulates the observed longitudinal and seasonal variation of plankton in the Scheldt estuary. The phytoplankton production in the estuary is governed by temperature, underwater available light, turbidity, nutrients, and discharge. Of all these factors, discharge seems to be dominant. High discharge increases the turbidity in the water column and thus reduces the underwater light, while low discharge means decreased nutrients. The marine phytoplankton species were present as far to the upstream limits of the brackish waters, with diatoms dominating in the spring and chlorophytes in early summer. The freshwater phytoplankton are seen from late spring to summer. Freshwater zooplankton followed the evolution of freshwater phytoplankton.
- Arndt Sandra, Regnier Pierre, Vanderborght Jean-Pierre, Seasonally-resolved nutrient export fluxes and filtering capacities in a macrotidal estuary, 10.1016/j.jmarsys.2009.02.008
- Arndt S., Vanderborght J.-P., Regnier P., Diatom growth response to physical forcing in a macrotidal estuary: Coupling hydrodynamics, sediment transport, and biogeochemistry, 10.1029/2006jc003581
- Arndt Sandra, Lacroix Geneviève, Gypens Nathalie, Regnier Pierre, Lancelot Christiane, Nutrient dynamics and phytoplankton development along an estuary–coastal zone continuum: A model study, 10.1016/j.jmarsys.2010.08.005
- Baeyens Willy, van Eck Bert, Lambert Claude, Wollast Roland, Goeyens Leo, 10.1023/a:1003164009031
- Blauw Anouk N., Los Hans F. J., Bokhorst Marinus, Erftemeijer Paul L. A., GEM: a generic ecological model for estuaries and coastal waters, 10.1007/s10750-008-9575-x
- Brion N, Andersson MGI, Elskens M, Diaconu C, Baeyens W, Dehairs F, Middelburg JJ, Nitrogen cycling, retention and export in a eutrophic temperate macrotidal estuary, 10.3354/meps07249
- Carbonnel Vincent, Lionard Marie, Muylaert Koenraad, Chou Lei, Dynamics of dissolved and biogenic silica in the freshwater reaches of a macrotidal estuary (The Scheldt, Belgium), 10.1007/s10533-009-9344-6
- Chen Margaret S., Wartel Stanislas, Eck Bert Van, Maldegem Dirk Van, Suspended matter in the Scheldt estuary, 10.1007/s10750-004-7122-y
- Cloern James E., Turbidity as a control on phytoplankton biomass and productivity in estuaries, 10.1016/0278-4343(87)90042-2
- de Brye Benjamin, de Brauwere Anouk, Gourgue Olivier, Kärnä Tuomas, Lambrechts Jonathan, Comblen Richard, Deleersnijder Eric, A finite-element, multi-scale model of the Scheldt tributaries, river, estuary and ROFI, 10.1016/j.coastaleng.2010.04.001
- Desmit X., Vanderborght J. P., Regnier P., Wollast R., Control of phytoplankton production by physical forcing in a strongly tidal, well-mixed estuary, 10.5194/bg-2-205-2005
- Dijkman Nicole A., Kromkamp Jacco C., Photosynthetic characteristics of the phytoplankton in the Scheldt estuary: community and single-cell fluorescence measurements, 10.1080/09670260600937791
- Di Toro, D. M., D. J. O’Connor & R. V. Thomann, 1971. A Dynamic Model of the Phytoplankton Population in the Sacramento-San Joaquin Delta. Advances in Chemistry Series, Non-equilibrium Systems in Natural Water Chemistry, Vol. 106. American Chemical Society, Washington, DC: 131–180.
- Di Toro Dominic M., Applicability of cellular equilibrium and monod theory to phytoplankton growth kinetics, 10.1016/0304-3800(80)90038-1
- Eppley, R. W., 1972. Temperature and phytoplankton growth in the sea. Fishery Bulletin, 70: 1063-1085.
- Flameling Inez A., Kromkamp Jacco, Responses of respiration and photosynthesis of Scenedesmus protuberans Fritsch to gradual and steep salinity increases, 10.1093/plankt/16.12.1781
- Fransz H.G., Verhagen J.H.G., Modelling research on the production cycle of phytoplankton in the Southern Bight of the North Sea in relation to riverborne nutrient loads, 10.1016/0077-7579(85)90029-8
- Gazeau Frédéric, Gattuso Jean-Pierre, Middelburg Jack J., Brion Natacha, Schiettecatte Laure-Sophie, Frankignoulle Michel, Borges Alberto Vieira, Planktonic and whole system metabolism in a nutrient-rich estuary (the Scheldt estuary), 10.1007/bf02696016
- Goosen Nico K., van Rijswijk Pieter, Brockmann Uwe, Comparison of heterotrophic bacterial production rates in early spring in the turbid estuaries of the Scheldt and the Elbe, 10.1007/bf00008569
- Gourge, O., 2011. Finite element modelling of sediment dynamics in the Scheldt. PhD Thesis, UCL: p. 151.
- Gourgue O., Baeyens W., Chen M.S., de Brauwere A., de Brye B., Deleersnijder E., Elskens M., Legat V., A depth-averaged two-dimensional sediment transport model for environmental studies in the Scheldt Estuary and tidal river network, 10.1016/j.jmarsys.2013.03.014
- Gypens N., Delhez E., Vanhoutte-Brunier A., Burton S., Thieu V., Passy P., Liu Y., Callens J., Rousseau V., Lancelot C., Modelling phytoplankton succession and nutrient transfer along the Scheldt estuary (Belgium, The Netherlands), 10.1016/j.jmarsys.2012.10.006
- HIC, 2015. http://www.hydra.vlaanderen.be/hic/servlet/index .
- Hofmann A. F., Soetaert K., Middelburg J. J., Present nitrogen and carbon dynamics in the Scheldt estuary using a novel 1-D model, 10.5194/bg-5-981-2008
- Ignatiades, L. & T. J. Smayda, 1970. Autecological studies on the marine diatom Rhizosolenia fragilissima Bergon. I. The influence of light, temperature and salinity. Journal of Phycology 6: 332–333.
- Ivlev, V. S., 1945. The biological productivity of waters. USP Sovereign Biology 19: 98–120.
- Klepper Olivier, van der Tol Marcel W. M., Scholten Huub, Herman Peter M. J., SMOES: a simulation model for the Oosterschelde ecosystem : Part I: Description and uncertainty analysis, 10.1007/bf00024647
- Koeman, R. P. T., C. J. E. Brochard, K. Fockens, G. L. Verweij & P. Esselink, 2004. Biomonitoring van Fytoplankton in de Nederlandse Zoute Wateren 2003 Kite Diagrammen, Koeman en Bijkerk, Ecologisch onderzoek en advies, Haren.
- Kremer James N., Nixon Scott W., A Coastal Marine Ecosystem, ISBN:9783642667190, 10.1007/978-3-642-66717-6
- Kromkamp J, Peene J, Possibility of net phytoplankton primary production in the turbid Schelde Estuary (SW Netherlands), 10.3354/meps121249
- Kromkamp Jacco C., Peene Jan, Changes in phytoplankton biomass and primary production between 1991 and 2001 in the Westerschelde estuary (Belgium/The Netherlands), 10.1007/s10750-004-7124-9
- Langdon, C., 1993. The significance of respiration production measurements based on both carbon and oxygen. In Li, W. K. W. & S. Y. Maestrini (eds), Measurement of Primary Production from the Molecular to the Global Scale, Vol. 197. ICESS MSS, International Council for the Exploration of the Sea, Copenhagen: pp. 69–78.
- Laws E., Caperon J., Carbon and nitrogen metabolism by Monochrysis lutheri: Measurement of growth-rate-dependent respiration rates, 10.1007/bf00388431
- Lingeman-Kosmerchock, M., 1978. Phytoplankton cells, their nutrient contents, mineralisation and sinking rates. Delft Hydraulics Laboratory Report R1310, Delft.
- Lionard Marie, Muylaert Koenraad, Gansbeke Dirk Van, Vyverman Wim, Influence of changes in salinity and light intensity on growth of phytoplankton communities from the Schelde river and estuary (Belgium/The Netherlands), 10.1007/s10750-004-7123-x
- Lionard M., Azémar F., Boulêtreau S., Muylaert K., Tackx M., Vyverman W., Grazing by meso- and microzooplankton on phytoplankton in the upper reaches of the Schelde estuary (Belgium/The Netherlands), 10.1016/j.ecss.2005.04.011
- Lionard Marie, Muylaert Koenraad, Tackx Michèle, Vyverman Wim, Evaluation of the performance of HPLC–CHEMTAX analysis for determining phytoplankton biomass and composition in a turbid estuary (Schelde, Belgium), 10.1016/j.ecss.2007.08.003
- Lionard Marie, Muylaert Koenraad, Hanoutti Abdel, Maris Tom, Tackx Michèle, Vyverman Wim, Inter-annual variability in phytoplankton summer blooms in the freshwater tidal reaches of the Schelde estuary (Belgium), 10.1016/j.ecss.2008.06.013
- Los, F. J., 1982. Mathematical simulation of algae blooms by the model BLOOM II. Delft Hydraulics Laboratory Publication No. 316, Delft.
- Meire Patrick, Ysebaert Tom, Damme Stefan Van, Bergh Erika Van den, Maris Tom, Struyf Eric, The Scheldt estuary: a description of a changing ecosystem, 10.1007/s10750-005-0896-8
- MUYLAERT KOENRAAD, VAN KERCKVOORDE ANDY, VYVERMAN WIM, SABBE KOEN, Structural characteristics of phytoplankton assemblages in tidal and non-tidal freshwater systems: a case study from the Schelde basin, Belgium, 10.1046/j.1365-2427.1997.00211.x
- Muylaert Koenraad, Sabbe Koen, Spring phytoplankton assemblages in and around the maximum turbidity zone of the estuaries of the Elbe (Germany), the Schelde (Belgium/The Netherlands) and the Gironde (France), 10.1016/s0924-7963(99)00037-8
- Muylaert K., Sabbe K., Vyverman W., Spatial and Temporal Dynamics of Phytoplankton Communities in a Freshwater Tidal Estuary (Schelde, Belgium), 10.1006/ecss.2000.0590
- Muylaert Koenraad, Van Mieghem Riet, Sabbe Koen, Tackx Micky, Vyverman Wim, 10.1023/a:1004017018702
- Muylaert Koenraad, van Wichelen Jeroen, Sabbe Koen, Vyverman Wim, Effects of freshets on phytoplankton dynamics in a freshwater tidal estuary (Schelde, Belgium), 10.1127/archiv-hydrobiol/150/2001/269
- Muylaert Koenraad, Tackx Micky, Vyverman Wim, Phytoplankton growth rates in the freshwater tidal reaches of the Schelde estuary (Belgium) estimated using a simple light-limited primary production model, 10.1007/s10750-004-7128-5
- Muylaert Koenraad, Dasseville Renaat, De Brabandere Loreto, Dehairs Frank, Vyverman Wim, Dissolved organic carbon in the freshwater tidal reaches of the Schelde estuary, 10.1016/j.ecss.2005.04.010
- Muylaert Koenraad, Sabbe Koen, Vyverman Wim, Changes in phytoplankton diversity and community composition along the salinity gradient of the Schelde estuary (Belgium/The Netherlands), 10.1016/j.ecss.2009.01.024
- NCEP, 2015. http://www.esrl.noaa.gov/psd/data/gridded/data.ncep.reanalysis2.html .
- Parsons, T. R., R. J. Le Brasseur & J. D. Fulton, 1967. Some observations on the dependence of zooplankton grazing on cell size and concentration of phytoplankton blooms. Journal of Oceanographical Society of Japan 23: 10–17.
- Parsons, T. R., M. Takahashi & B. Hargrave, 1984. Biological Oceanographic Processes, 3rd edn. Pergamon Press, Oxford.
- RWS, 2015. Ministerie van Verkeer en Waterstaat. http://www.waterbase.nl .
- ScheldtMonitor, Onderzoek Milieu-effecten Sigmaplan, 2015. Multidisciplinaire studie rond het estuariene milieu van de Zeeschelde. Ecosystem Management Research Group, UA; Protistology and Aquatic Ecology, Ugent; Laboratoire d’Ecologie des Hydrosystèmes, Université Paul Sabatier – France, i.o.v. Vlaamse Overheid; Beleidsdomein Mobiliteit en Openbare Werken; Waterwegen en zeekanaal NV. Retrieved from http://www.scheldemonitor.be/imis.php?module=dataset&dasid=1381 .
- Smetacek V., The annual cycle of protozooplankton in the Kiel Bight, 10.1007/bf00394657
- Soetaert Karline, Herman Peter M.J., Kromkamp Jacco, Living in the twilight: estimating net phytoplankton growth in the Westerschelde estuary (The Netherlands) by means of an ecosystem model (MOSES), 10.1093/plankt/16.10.1277
- Soetaert Karline, Herman Peter M. J., Carbon flows in the Westerschelde estuary (The Netherlands) evaluated by means of an ecosystem model (MOSES), 10.1007/bf00008584
- Tackx, M. L. M., 1987. Grazing door zooplankton in de Oosterschelde. PhD Thesis, Lab. voor ecologie en systematiek, Vrije Universiteit Brussel.
- Tackx M. L. M., Zooplankton in the Schelde estuary, Belgium and The Netherlands. Spatial and temporal patterns, 10.1093/plankt/fbh016
- van der Zee Claar, Roevros Nathalie, Chou Lei, Phosphorus speciation, transformation and retention in the Scheldt estuary (Belgium/The Netherlands) from the freshwater tidal limits to the North Sea, 10.1016/j.marchem.2007.01.003
- Vanderborght J.P., Wollast R., Loijens M., Regnier P., 10.1023/a:1015573131561
- Vanderborght Jean-Pierre, Folmer Inge M., Aguilera David R., Uhrenholdt Thomas, Regnier Pierre, Reactive-transport modelling of C, N, and O2 in a river–estuarine–coastal zone system: Application to the Scheldt estuary, 10.1016/j.marchem.2006.06.006
- Van Rijn, L. C., 2010. Tidal phenomena in the Scheldt Estuary. Report, Deltares: p. 105.
- Waterbase, 2015. Ministerie van Verkeer en Waterstaat. http://www.waterbase.nl .
- Weger Harold G., Herzig Ronny, Falkowski Paul G., Turpin David H., Respiratory losses in the light in a marine diatom: Measurements by short-term mass spectrometry : Respiratory losses in the light, 10.4319/lo.1989.34.7.1153
- Wroblewski, J. S., 1977. A model of phytoplankton plume formation during variable Oregon upwelling. Journal of Marine Research 35: 357–394.
- Admiraal W., Influence of light and temperature on the growth rate of estuarine benthic diatoms in culture, 10.1007/bf00395586
- Baretta-Bekker J.G., Baretta J.W., Latuhihin M.J., Desmit X., Prins T.C., Description of the long-term (1991–2005) temporal and spatial distribution of phytoplankton carbon biomass in the Dutch North Sea, 10.1016/j.seares.2008.10.007
- Griffin Sandra L., Herzfeld Michael, Hamilton David P., Modelling the impact of zooplankton grazing on phytoplankton biomass during a dinoflagellate bloom in the Swan River Estuary, Western Australia, 10.1016/s0925-8574(00)00122-1
- Kishi Michio J., Kashiwai Makoto, Ware Daniel M., Megrey Bernard A., Eslinger David L., Werner Francisco E., Noguchi-Aita Maki, Azumaya Tomonori, Fujii Masahiko, Hashimoto Shinji, Huang Daji, Iizumi Hitoshi, Ishida Yukimasa, Kang Sukyung, Kantakov Gennady A., Kim Hyun-cheol, Komatsu Kosei, Navrotsky Vadim V., Smith S. Lan, Tadokoro Kazuaki, Tsuda Atsushi, Yamamura Orio, Yamanaka Yasuhiro, Yokouchi Katsumi, Yoshie Naoki, Zhang Jing, Zuenko Yury I., Zvalinsky Vladimir I., NEMURO—a lower trophic level model for the North Pacific marine ecosystem, 10.1016/j.ecolmodel.2006.08.021
- Mague T. H., Friberg E., Hughes D. J., Morris I., Extracellular release of carbon by marine phytoplankton; a physiological approach1 : Mague et al., 10.4319/lo.1980.25.2.0262
- Montagnes David J. S., Franklin Montagnes, Effect of temperature on diatom volume, growth rate, and carbon and nitrogen content: Reconsidering some paradigms, 10.4319/lo.2001.46.8.2008
- NIOO, 2015. http://www.nioo.knaw.nl/en/content/datasets .
- Winterwerp Johan Christian, Wang Zheng Bing, van der Kaaij Theo, Verelst Kristof, Bijlsma Arnout, Meersschaut Youri, Sas Marc, Flow velocity profiles in the Lower Scheldt estuary, 10.1007/s10236-006-0063-4
Bibliographic reference |
Naithani, J. ; de Brye, B. ; Buyze, E. ; Vyverman, W. ; Legat, V. ; et. al. An ecological model for the Scheldt estuary and tidal rivers ecosystem: spatial and temporal variability of plankton. In: Hydrobiologia : the international journal on limnology and marine sciences, Vol. 775, p. 51-67 (2016) |
Permanent URL |
http://hdl.handle.net/2078.1/174177 |