User menu

Morphological characterization of traditional cacao (Theobroma cacao L.) plants in Cuba

Bibliographic reference Bidot Martinez, Igor ; Valdés de la Cruz, Marylin ; Riera Nelson, Manuel ; Bertin, Pierre. Morphological characterization of traditional cacao (Theobroma cacao L.) plants in Cuba. In: Genetic Resources and Crop Evolution : an international journal, , p. 27 p. (2016)
Permanent URL
  1. Aikpokpodion PO (2012) Defining genetic diversity in the chocolate tree, Theobroma cacao L. grown in West and Central Africa. Genetic diversity in plants. M. Caliskan. Croatia, InTech., pp 185–212
  2. Alverson William S., Whitlock Barbara A., Nyffeler Reto, Bayer Clemens, Baum David A., Phylogeny of the Core Malvales: Evidence from ndhF Sequence Data, 10.2307/2656928
  3. Anon (1981) Genetic resources of cocoa. Rome, Italy, IBPGR Secretariat, 25 p
  4. Aragon Obando EM (2009) Genetic characterization of Theobroma cacao L. in Nicaragua. Master Master Thesis, University of Helsinki, 50 p
  5. The genetic diversity of cacao and its utilization, ISBN:9780851996196, 10.1079/9780851996196.0000
  6. Batugal P, Ramanatha Rao V, Oliver J (eds) (2005) Coconut genetic resources. Serdang, Selangor DE, Malaysia. International Plant Genetic Resources Institute—Regional Office for Asia, the Pacific and Oceania (IPGRI-APO)
  7. Bekele Frances, Bekele Isaac, A Sampling of the Phenetic Diversity of Cacao in the International Cocoa Gene Bank of Trinidad, 10.2135/cropsci1996.0011183x003600010010x
  8. Bekele F, Butler DR (2000) Proposed list of cocoa descriptors for characterisation. In: Eskes AB, Engels JMM, Lass RA (eds) Proceedings of the CFC/ICCO/IPGRI project workshop. IPGRI, Montpellier, pp 41–48
  9. Bekele F. L., Kennedy A. J., David C. Mc, Lauckner F. B., Bekele I., Numerical taxonomic studies on cacao (Theobroma cacao L.) in Trinidad, 10.1007/bf00025608
  10. Bekele FL, Bidaisee G, Persad N (2004) A comparison of the phenotypic diversity of two samples from the International Cocoa Genebank, Trinidad. Annual Report 2003. Cocoa Research Unit. St. Augustine, Trinidad and Tobago, Cocoa Research Unit, The University of the West Indies, pp 27–35
  11. Bekele Frances L., Bekele Isaac, Butler David R., Bidaisee Gillian G., Patterns of Morphological Variation in a Sample of Cacao (Theobroma Cacao L.) Germplasm from the International Cocoa Genebank, Trinidad, 10.1007/s10722-004-6692-x
  12. Bhattacharjee R, Kumar PL (2007) Cacao. In: Kole C (ed) Genome mapping and molecular breeding in plants. Springer, Berlin, pp 127–142
  13. Bidot Martínez Igor, Riera Nelson Manuel, Flamand Marie-Christine, Bertin Pierre, Genetic diversity and population structure of anciently introduced Cuban cacao Theobroma cacao plants, 10.1007/s10722-014-0136-z
  14. Bowcock A. M., Ruiz-Linares A., Tomfohrde J., Minch E., Kidd J. R., Cavalli-Sforza L. L., High resolution of human evolutionary trees with polymorphic microsatellites, 10.1038/368455a0
  15. Cakirer MS (2003) Color as an indicator of flavanol content in the fresh seeds of Theobroma cacao L. Master Science Thesis, The Pennsylvania State University, 91 p
  16. Centre de Coopération Internationale en Recherche Agronomique pour le Développement (2013) “CocoaGenDB.” Retrieved 18/4/2013, 2013.
  17. Cocoa Research Unit (2010) Annual Report 2009. St. Augustine, Trinidad and Tobago, Cocoa Research Unit, The University of the West Indies, p 85
  18. R Core Team (2013) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria
  19. Días LAS (ed) (2001) Genetic improvement of cacao. Food and Agriculture Organization, Rome, Italy
  20. D’Orazio M (2013) StatMatch: statistical matching. R package. Version 1.1.0.
  21. Efombagn MIB, Sounigo O, Nyassé S, Manzanares-Dauleux M, Eskes AB (2009) Phenotypic variation of cacao (Theobroma cacao L.) on farms and in the gene bank in Cameroon. J Plant Breed Crop Sci 1:258–264
  22. Engels J. M. M., A systematic description of cacao clones. III. Relationships between clones, between characteristics and some consequences for the cacao breeding, 10.1007/bf00042152
  23. Engels JMM, Bartley BGD, Enriquez GA (1980) Cacao descriptors, their stage and modus operandi. Turrialba 30:209–218
  24. Eskes AB, Engels JMM, Lass RA (2000) Working procedures for cocoa germplam evaluation and selection. In: Proceedings of the CFC/ICCO/IPGRI project workshop. Montpellier, France, International Plant Genetic Resources Institute, Rome, Italy
  25. González Muñoz YDC (2003) Caracterización morfológica y molecular de genotipos de Dioscorea alata y D. trifida del Instituto de Investigación Agropecuaria de Panamá, IDIAP y CATIE, Costa Rica. Magíster Scientiae Tesis de Maestría, Escuela de Postgrado del CATIE, 92 p
  26. Gower J. C., A General Coefficient of Similarity and Some of Its Properties, 10.2307/2528823
  27. Grum M, Atieno F (2007) Statistical analysis for plant genetic resources: clustering and indices in R made simple. Biodiversity International, Rome, Italy, 40 p
  28. Husson F, Josse J, Le S, Jeremy M (2013) FactoMineR: multivariate exploratory data analysis and data mining with R
  29. IPGRI and Cornell University (2004) Análisis de la diversidad genética utilizando datos de marcadores moleculares: Módulo de aprendizaje. Instituto Internacional de Recursos Fitogenéticos (IPGRI), Roma, Italia
  30. Iwaro A.D., Bekele F.L., Butler D.R., 10.1023/a:1022855131534
  31. Jombart Thibaut, adegenet: a R package for the multivariate analysis of genetic markers, 10.1093/bioinformatics/btn129
  32. Jombart Thibaut, Ahmed Ismaïl, adegenet 1.3-1: new tools for the analysis of genome-wide SNP data, 10.1093/bioinformatics/btr521
  33. Lachenaud P., Bonnot F., Oliver G., 10.1023/a:1008763321959
  34. Lanaud C., Risterucci A. M., Pieretti I., Falque M., Bouet A., Lagoda P. J. L., Isolation and characterization of microsatellites in Theobroma cacao L., 10.1046/j.1365-294x.1999.00802.x
  35. Lê S, Josse J, Husson F (2008) FactoMineR: an R package for multivariate analysis. J Stat Softw 25:1–18
  36. Loor R. G., Risterucci A. M., Courtois B., Fouet O., Jeanneau M., Rosenquist E., Amores F., Vasco A., Medina M., Lanaud C., Tracing the native ancestors of the modern Theobroma cacao L. population in Ecuador, 10.1007/s11295-008-0196-3
  37. Maharaj K, Maharaj P, Bekele FL, Ramnath D, Bidaisee GG, Bekele I, Persad C, Jennings K, Sankar R (2011) Trinidad selected hybrids: an investigation of the phenotypic and agro-economic traits of 20 selected cacao cultivars. Trop Agric (Trinidad) 88:175–185
  38. Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Res 27:209–220
  39. Marcano Maria, Morales Sonia, Hoyer Maria Theresa, Courtois Brigitte, Risterucci Ange Marie, Fouet Olivier, Pugh Tatiana, Cros Emile, Gonzalez Ventura, Dagert Manuel, Lanaud Claire, A genomewide admixture mapping study for yield factors and morphological traits in a cultivated cocoa (Theobroma cacao L.) population, 10.1007/s11295-008-0185-6
  40. Martínez WJ (2007) Caracterización morfológica y molecular del Cacao Nacional Boliviano y de selecciones élites del Alto Beni, Bolivia. Magister Scientiae Thesis, Centro Agronómico Tropical de Investigación y Enseñanza, 88 p
  41. Monteiro Wilson Reis, Lopes Uilson Vanderlei, Clement Didier, Genetic Improvement in Cocoa, Breeding Plantation Tree Crops: Tropical Species ISBN:9780387711997 p.589-626, 10.1007/978-0-387-71201-7_16
  42. Motamayor J C, Risterucci A M, Lopez P A, Ortiz C F, Moreno A, Lanaud C, Cacao domestication I: the origin of the cacao cultivated by the Mayas, 10.1038/sj.hdy.6800156
  43. Motamayor J C, Risterucci A M, Heath M, Lanaud C, Cacao domestication II: progenitor germplasm of the Trinitario cacao cultivar, 10.1038/sj.hdy.6800298
  44. Motamayor Juan C., Lachenaud Philippe, da Silva e Mota Jay Wallace, Loor Rey, Kuhn David N., Brown J. Steven, Schnell Raymond J., Geographic and Genetic Population Differentiation of the Amazonian Chocolate Tree (Theobroma cacao L), 10.1371/journal.pone.0003311
  45. Navarro D (2013) Learning statistics with R: a tutorial for psychology students and other beginners. University of Adelaide, Adelaide, Australia
  46. Núñez González N (2010) El cacao y el chocolate en Cuba. Fundación Fernando Ortíz, La Habana, 336 p
  47. Paradis E., Claude J., Strimmer K., APE: Analyses of Phylogenetics and Evolution in R language, 10.1093/bioinformatics/btg412
  48. Pérez Zuñiga JI (2009) Evaluación y caracterización de selecciones clonales de cacao (Theobroma cacao L.) del Programa de Mejoramiento del CATIE. Magister Scientiae en Agricultura Ecológica Tesis de Maestría, 149 p
  49. Pugh T., Fouet O., Risterucci A. M., Brottier P., Abouladze M., Deletrez C., Courtois B., Clement D., Larmande P., N’Goran J. A. K., Lanaud C., A new cacao linkage map based on codominant markers: development and integration of 201 new microsatellite markers, 10.1007/s00122-003-1533-4
  50. Raboin L-M, Paulin D, Cilas C, Eskes AB (1993) Analyse génétique de quelques caractères quantitatifs des fleurs de cacaoyers (Theobroma cacao L.). Leur intérêt pour l’évaluation de la diversité de l’espèce. Café Cacao Thé 37:273–282
  51. Rahman MM, Rahman MA, Hossain A, Rasul G (2011) Comparative study on morphological, physiological and molecular genetic diversity analysis in rice (Oryza sativa L.). Libyan Agric Res Center J Int 2:85–93
  52. Santos Ronaldo Carvalho, Pires José Luiz, Correa Ronan Xavier, Morphological characterization of leaf, flower, fruit and seed traits among Brazilian Theobroma L. species, 10.1007/s10722-011-9685-6
  53. Saunders James A., Mischke Sue, Leamy Emily A., Hemeida Alaa A., Selection of international molecular standards for DNA fingerprinting of Theobroma cacao, 10.1007/s00122-004-1762-1
  54. Schliep Klaus Peter, phangorn: phylogenetic analysis in R, 10.1093/bioinformatics/btq706
  55. Sereno Maria L., Albuquerque Paulo S. B., Vencovsky Roland, Figueira Antonio, Genetic Diversity and Natural Population Structure of Cacao (Theobroma cacao L.) from the Brazilian Amazon Evaluated by Microsatellite Markers, 10.1007/s10592-005-7568-0
  56. Shannon CE, Weaver W (1963) The mathematical theory of communication. University of Illinois, Urbana Press, Illinios, 117 p
  57. , An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II, 10.1046/j.1095-8339.2003.t01-1-00158.x
  58. , An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III : APG III, 10.1111/j.1095-8339.2009.00996.x
  59. Turnbull CJ, Hadley P (2011) International Cocoa Germplasm Database (ICGD). NYSE Liffe/CRA Ltd./University of Reading, UK
  60. USDA ARS National Genetic Resources Program (2013) Germplasm Resources Information Network (GRIN). Retrieved 18/4/2013, 2013.
  61. Wellensiek SJ (1931) The genetics of cotyledon colour in cocoa as a basis for quality selection. Archief voor de Koffiecultuur in Nederlandsch-Indië 5:217–233
  62. Yang Ji Yong, Scascitelli Moira, Motilal Lambert A., Sveinsson Saemundur, Engels Johannes M. M., Kane Nolan C., Dempewolf Hannes, Zhang Dapeng, Maharaj Kamaldeo, Cronk Quentin C. B., Complex origin of Trinitario-type Theobroma cacao (Malvaceae) from Trinidad and Tobago revealed using plastid genomics, 10.1007/s11295-013-0601-4