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Mutations in chicory FEH genes are statistically associated with enhanced resistance to post-harvest inulin depolymerization

Bibliographic reference Dauchot, Nicolas ; Raulier, Pierre ; maudoux, Olivier ; Notté, Christine ; Bertin, Pierre ; et. al. Mutations in chicory FEH genes are statistically associated with enhanced resistance to post-harvest inulin depolymerization. In: Theoretical and Applied Genetics : international journal of plant breeding research, Vol. 127, no. 1, p. 125-135 (2014)
Permanent URL http://hdl.handle.net/2078.1/134502
  1. Arcia P.L., Costell E., Tárrega A., Inulin blend as prebiotic and fat replacer in dairy desserts: Optimization by response surface methodology, 10.3168/jds.2010-3873
  2. Baert Joost R.A, The effect of sowing and harvest date and cultivar on inulin yield and composition of chicory (Cichorium intybus L.) roots, 10.1016/s0926-6690(97)00008-3
  3. Cadalen T., Mörchen M., Blassiau C., Clabaut A., Scheer I., Hilbert J-L., Hendriks T., Quillet M-C., Development of SSR markers and construction of a consensus genetic map for chicory (Cichorium intybus L.), 10.1007/s11032-009-9369-5
  4. CGPDB (2013) Lettuce Genome Resource. https://lgr.genomecenter.ucdavis.edu/Home.php . Accessed online 2013/05/20
  5. Clark Michelle J, Robien Kim, Slavin Joanne L, Effect of prebiotics on biomarkers of colorectal cancer in humans: a systematic review, 10.1111/j.1753-4887.2012.00495.x
  6. Clausen Morten R., Bach Vibe, Edelenbos Merete, Bertram Hanne C., Metabolomics Reveals Drastic Compositional Changes during Overwintering of Jerusalem Artichoke (Helianthus tuberosus L.) Tubers, 10.1021/jf302067m
  7. Closa-Monasterolo R., Gispert-Llaurado M., Luque V., Ferre N., Rubio-Torrents C., Zaragoza-Jordana M., Escribano J., Safety and efficacy of inulin and oligofructose supplementation in infant formula: Results from a randomized clinical trial, 10.1016/j.clnu.2013.02.009
  8. Comai Luca, Young Kim, Till Bradley J., Reynolds Steven H., Greene Elizabeth A., Codomo Christine A., Enns Linda C., Johnson Jessica E., Burtner Chris, Odden Anthony R., Henikoff Steven, Efficient discovery of DNA polymorphisms in natural populations by Ecotilling, 10.1111/j.0960-7412.2003.01999.x
  9. De Mendiburu F (2010) Agricolae: Statistical Procedures for Agricultural Research Using R (Online) http://tarwi.lamolina.edu.pe/~fmendiburu/ . Accessed online 2013/03/05
  10. Di Bartolomeo F, Startek JB, Van den Ende W (2013) Prebiotics to fight diseases: reality or fiction? Phytother Res
  11. Flamm Gary, Glinsmann Walter, Kritchevsky David, Prosky Leon, Roberfroid Marcel, Inulin and Oligofructose as Dietary Fiber: A Review of the Evidence, 10.1080/20014091091841
  12. Gouesnard B., MSTRAT: An Algorithm for Building Germ Plasm Core Collections by Maximizing Allelic or Phenotypic Richness, 10.1093/jhered/92.1.93
  13. Gutiérrez R, Current perspectives on mRNA stability in plants: multiple levels and mechanisms of control, 10.1016/s1360-1385(99)01484-3
  14. Hellwege Elke M, Raap Maik, Gritscher Dominique, Willmitzer Lothar, Heyer Arnd G, Differences in chain length distribution of inulin fromCynara scolymusandHelianthus tuberosusare reflected in a transient plant expression system using the respective 1-FFT cDNAs, 10.1016/s0014-5793(98)00386-x
  15. HENDRY GEORGE A. F., Evolutionary origins and natural functions of fructans - a climatological, biogeographic and mechanistic appraisal, 10.1111/j.1469-8137.1993.tb04525.x
  16. Leroy Gaëlle, Grongnet Jean François, Mabeau Serge, Corre Daniel Le, Baty-Julien Céline, Changes in inulin and soluble sugar concentration in artichokes (Cynara scolymusL.) during storage, 10.1002/jsfa.3948
  17. Maroufi Asad, Van Bockstaele Erik, De Loose Marc, Validation of reference genes for gene expression analysis in chicory (Cichorium intybus) using quantitative real-time PCR, 10.1186/1471-2199-11-15
  18. Maroufi A, Van Bockstaele E, De Loose M (2012) Differential expression of fructan 1-exohydrolase genes involved in inulin biodegradation in chicory (Cichorium intybus) cultivars. Aust J Crop Sci 6:1362–1368
  19. Michiels A., Van Laere A., Van den Ende W., Tucker M., Expression analysis of a chicory fructan 1-exohydrolase gene reveals complex regulation by cold, 10.1093/jxb/erh153
  20. Millevoi Stefania, Vagner Stéphan, Molecular mechanisms of eukaryotic pre-mRNA 3′ end processing regulation, 10.1093/nar/gkp1176
  21. Murray M.G., Thompson W.F., Rapid isolation of high molecular weight plant DNA, 10.1093/nar/8.19.4321
  22. Muys Céline, Thienpont Claire-Noëlle, Dauchot Nicolas, Maudoux Olivier, Draye Xavier, Cutsem Pierre Van, Integration of AFLPs, SSRs and SNPs markers into a new genetic map of industrial chicory (Cichorium intybusL. var.sativum), 10.1111/pbr.12113
  23. Nguyen‐Quoc Binh, Foyer Christine H., A role for ‘futile cycles’ involving invertase and sucrose synthase in sucrose metabolism of tomato fruit, 10.1093/jexbot/52.358.881
  24. Nowak B., von Mueffling T., Grotheer J., Klein G., Watkinson B.-M., Energy Content, Sensory Properties, and Microbiological Shelf Life of German Bologna-Type Sausages Produced with Citrate or Phosphate and with Inulin as Fat Replacer, 10.1111/j.1750-3841.2007.00566.x
  25. Portes Maria Teresa, Figueiredo-Ribeiro Rita de Cássia L., de Carvalho Maria Angela M., Low temperature and defoliation affect fructan-metabolizing enzymes in different regions of the rhizophores of Vernonia herbacea, 10.1016/j.jplph.2008.01.004
  26. R Development Core Team (2013) R: A language and environment for statistical coputing. R Foundation for Statistical Computing, Vienna
  27. Ritsema Tita, Hernández Lázaro, Verhaar Auke, Altenbach Denise, Boller Thomas, Wiemken Andres, Smeekens Sjef, Developing fructan-synthesizing capability in a plant invertase via mutations in the sucrose-binding box, 10.1111/j.1365-313x.2006.02862.x
  28. Saengthongpinit Wanpen, Sajjaanantakul Tanaboon, Influence of harvest time and storage temperature on characteristics of inulin from Jerusalem artichoke (Helianthus tuberosus L.) tubers, 10.1016/j.postharvbio.2005.03.004
  29. SPW-Portail de l’Agriculture wallonne (2013) Catalogues nationaux des variétés d’espèces de plantes agricoles et des variétés d’espèces de légumes. http://agriculture.wallonie.be/apps/spip_wolwin/article.php3?id_article=68 . Accessed online 2013/05/31
  30. van Arkel Jeroen, Vergauwen Rudy, Sévenier Robert, Hakkert Johanna C., van Laere André, Bouwmeester Harro J., Koops Andries J., van der Meer Ingrid M., Sink filling, inulin metabolizing enzymes and carbohydrate status in field grown chicory (Cichorium intybus L.), 10.1016/j.jplph.2012.06.005
  31. van den Brink L, Wilting P (2012) Rassenbulletin cichorei. http://www.kennisakker.nl/kenniscentrum/document/rassenbulletin-cichorei . Accessed online 2013/05/31
  32. Van den Ende Wim, Lammens Willem, Van Laere André, Schroeven Lindsey, Le Roy Katrien, Donor and acceptor substrate selectivity among plant glycoside hydrolase family 32 enzymes : Donor and acceptor substrate selectivity in GH32, 10.1111/j.1742-4658.2009.07316.x
  33. Van den Ende Wim, Michiels An, De Roover Joke, Van Laere Andrea, Fructan Biosynthetic and Breakdown Enzymes in Dicots Evolved From Different Invertases. Expression of Fructan Genes Throughout Chicory Development, 10.1100/tsw.2002.288
  34. Van den Ende Wim, Michiels An, Van Wonterghem Dominik, Vergauwen Rudy, Van Laere André, Cloning, Developmental, and Tissue-Specific Expression of Sucrose:Sucrose 1-Fructosyl Transferase fromTaraxacum officinale. Fructan Localization in Roots, 10.1104/pp.123.1.71
  35. ENDE WIM, MINTIENS ANNEMIEKE, SPELEERS HILDE, ONUOHA AMABILIS A., LAERE ANDRE, The metabolism of fructans in roots of Cichorium intybus during growth, storage and forcing, 10.1111/j.1469-8137.1996.tb01874.x
  36. Van den Ende W., Valluru R., Sucrose, sucrosyl oligosaccharides, and oxidative stress: scavenging and salvaging?, 10.1093/jxb/ern297
  37. Van den Ende W., Van Laere A., Induction of 1-FEH in Mature Chicory Roots Appears to be Related to Low Temperatures Rather than to Leaf Damage, 10.1100/tsw.2002.857
  38. Van Laere A., Van Den Ende W., Inulin metabolism in dicots: chicory as a model system, 10.1046/j.1365-3040.2002.00865.x
  39. Van Waes Chris, Baert Joost, Carlier Lucien, Van Bockstaele Erik, A rapid determination of the total sugar content and the average inulin chain length in roots of chicory (Cichorium intybusL), 10.1002/(sici)1097-0010(199801)76:1<107::aid-jsfa911>3.0.co;2-6
  40. Vandoorne B., Mathieu A.-S., Van den Ende W., Vergauwen R., Périlleux C., Javaux M., Lutts S., Water stress drastically reduces root growth and inulin yield in Cichorium intybus (var. sativum) independently of photosynthesis, 10.1093/jxb/ers095
  41. Verhaest Maureen, Lammens Willem, Le Roy Katrien, De Ranter Camiel J., Van Laere André, Rabijns Anja, Van den Ende Wim, Insights into the fine architecture of the active site of chicory fructan 1-exohydrolase: 1-kestose as substrate vs sucrose as inhibitor, 10.1111/j.1469-8137.2007.01988.x
  42. Verhaest Maureen, Ende Wim Van den, Roy Katrien Le, De Ranter Camiel J., Laere André Van, Rabijns Anja, X-ray diffraction structure of a plant glycosyl hydrolase family 32 protein: fructan 1-exohydrolase IIa of Cichorium intybus : Structure of 1-FEH Iia, 10.1111/j.1365-313x.2004.02304.x
  43. Vijn Irma, Smeekens Sjef, Fructan: More Than a Reserve Carbohydrate?, 10.1104/pp.120.2.351
  44. Vlaanderen-Landbouw en Visserij (2013) Industriële cichorei: resultaten van rassenproeven. http://lv.vlaanderen.be/nlapps/docs/default.asp?fid=153 . Accessed online 2013/05/31