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All Publications

Displaying 9 results.
    • Journal article
    Cross-biome comparison of microbial association networks
    Faust, Karoline Lima Mendez, Gipsi[UCL] Lerat, Jean-Sébastien[UCL] Sathirapongsasuti, Jarupon F. Knight, Rob Huttenhower, Curtis Lenaerts, Tom Raes, Jeroen (2015) Frontiers in Microbiology — Vol. 6, no.1, p. 1200 (2015)
    • Journal article
    Pathway discovery in metabolic networks by subgraph extraction
    Faust, Karoline Dupont, Pierre[UCL] Callut, Jerome[UCL] van Helden, Jacques (2010) Bioinformatics — Vol. 26, no. 9, p. 1211-1218 (2010)
    • Journal article
    NeAT: a toolbox for the analysis of biological networks, clusters, classes and pathways.
    Brohée, Sylvain Faust, Karoline Lima Mendez, Gipsi[UCL] Sand, Olivier Janky, Rekin's Vanderstocken, Gilles Deville, Yves[UCL] van Helden, Jacques (2008) Nucleic acids research — Vol. 36, no. Web Server issue, p. W444-51 (2008)
    • Journal article
    Population-level analysis of gut microbiome variation
    Falony, Gwen Joossens, Marie Vieira-Silva, Sara Wang, Jun Darzi, Youssef Faust, Karoline Kurilshikov, Alexander Bonder, Marc Jan Valles-Colomer, Mireia Vandeputte, Doris Tito, Raul Y. Chaffron, Samuel Rymenans, Leen Verspecht, Chloë De Sutter, Lise Lima Mendez, Gipsi[UCL] D’hoe, Kevin Jonckheere, Karl Homola, Daniel Garcia, Roberto Tigchelaar, Ettje F. Eeckhaudt, Linda Fu, Jingyuan Henckaerts, Liesbet Zhernakova, Alexandra Wijmenga, Cisca Raes, Jeroen (2016) Science — Vol. 352, no.6285, p. 560-564 (2016)
    • Journal article
    Network Analysis Tools: from biological networks to clusters and pathways
    Brohée, Sylvain Faust, Karoline Lima Mendez, Gipsi[UCL] Vanderstocken, Gilles van Helden, Jacques (2008) Nature Protocols — Vol. 3, no.10, p. 1616-1629 (2008)
    • Journal article
    Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes
    Hingamp, Pascal Grimsley, Nigel Acinas, Silvia G Clerissi, Camille Subirana, Lucie Poulain, Julie Ferrera, Isabel Sarmento, Hugo Villar, Emilie Lima Mendez, Gipsi[UCL] Faust, Karoline Sunagawa, Shinichi Claverie, Jean-Michel Moreau, Hervé Desdevises, Yves Bork, Peer Raes, Jeroen de Vargas, Colomban Karsenti, Eric Kandels-Lewis, Stefanie Jaillon, Olivier Not, Fabrice Pesant, Stéphane Wincker, Patrick Ogata, Hiroyuki (2013) The ISME Journal — Vol. 7, no.9, p. 1678-1695 (2013)
    • Speech
    Predicting metabolic pathways from bacterial operons and regulons
    Faust, Karoline Croes, Didier Dupont, Pierre[UCL] Van Helden, Jacques (2010) European Conference on Computational Biology (ECCB10) — Ghent, Belgium
    • Speech
    Inference of pathways from metabolic networks by subgraph extraction
    Faust, Karoline Callut, Jérôme[UCL] Dupont, Pierre[UCL] van Helden, Jacques (2008) Second International Workshop on Machine Learning in Systems Biology (MLSB) — Brussel, Belgium
    • Speech
    Inference of pathways from metabolic networks by subgraph extraction
    Faust, Karoline Dupont, Pierre[UCL] Callut, Jérôme[UCL] van Helden, Jacques (2007) Benelux bioinformatics conference BBC07 — Leuven, Belgium