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Fomitiporia in sub-Saharan Africa: morphology and multigene phylogenetic analysis support three new species from the Guineo-Congolian rainforest.

Bibliographic reference Amalfi, Mario ; Yombiyeni, Prudence ; Decock, Cony. Fomitiporia in sub-Saharan Africa: morphology and multigene phylogenetic analysis support three new species from the Guineo-Congolian rainforest.. In: Mycologia, Vol. 102, no. 6, p. 1303-17 (2010)
Permanent URL http://hdl.handle.net/2078.1/33393
  1. Adams RP, Demeke T, Abulfatih HA. 1993. RAPD DNA fingerprints and terpenoids: clues to past migrations of Juniperus in Arabia and east Africa. Theor Appl Gen 87: 22–26.
  2. Assefa A, Ehrich D, Taberlet P, Nemomissa S, Brochmann C. 2007. Pleistocene colonization of Afroalpine ‘sky islands’ by the artic-alpine Arabis alpina. Heredity 99: 133–142.
  3. Bernicchia A. 1990. Polyporaceae s.l. in Italia. Bologna: Istituto di Patologia Vegetale. 808 p.
  4. Buchanan PK, Ryvarden L. 1993. Type studies in the Polyporaceae 24. Species described by Cleland, Rodway and Cheel. Aust Syst Bot 6:215–235.
  5. Cui BK, Dai YC. 2008. Wood-rotting in eastern China 2. A new species of Fomitiporia from Wanmulin Nature Reserve, Fujian Province. Mycotaxon 105:343–348.
  6. Dai YC, Cui BK. 2005. Two new species of the Hymenochaetaceae from eastern China. Mycotaxon 94:341–347.
  7. ———, Zang M. 2002. Fomitiporia tibetica, a new species of Hymenochaetaceae. Mycotaxon 83:217–222.
  8. ———, ———, Decock C. 2008. A new species of Fomitiporia (Hymenochaetaceae, Basidiomycota) from China. Mycol Res 112:375–380.
  9. ———, Zhang M, Zhou T-S. 2001. New and noteworthy species of Hymenochaetaceae from China. Mycosystema 20:16–21.
  10. David A, Dequatre B, Fiasson JL. 1982. Two new Phellinus with globose, cyanophilous spores. Mycotaxon 14:160–174.
  11. ———, Herrera Figueroa S, Robledo G, Castillo G. 2007. Fomitiporia punctata (Basidiomycota, Hymenochaetales) and its presumed taxonomic synonyms in America: taxonomy and phylogeny of some species from tropical/subtropical areas. Mycologia 99:733–752.
  12. Decock C, Bitew A, Castillo G. 2005. Fomitiporia tenuis and Fomitiporia aethiopica (Basidiomycetes, Hymenochaetales), two undescribed species from the Ethiopian Highlands: taxonomy and phylogeny. Mycologia 97: 124–132.
  13. Degreef J, Fischer E, Sharp C, Raspé O. 2009. African Morchella crassipes revealed by analysis of nr DNA ITS. Nova Hedwigia 88:11–22.
  14. Douanla-Meli C. 2007. Fungi of Cameroon. Ecological diversity with emphasis on the taxonomy of non-gilled Hymenomycetes from the Mbalmayo Forest Reserve. Bibliothec Mycol 202:1–410.
  15. ———. 2006. Biodiversity and geographic distribution of Basidiomycetes causing esca-associates white rot in grapevine: a worldwide perspective. Phytopath Medit 45:S30–S42.
  16. Fischer M. 2002. A new wood-decaying Basidiomycetes species associated with Esca of grapevine: Fomitiporia mediterranea (Hymenochaetales). Mycol Prog 1:315–324.
  17. ———, Binder M. 2004. Species recognition, geographic distribution and host-pathogen relationships: a case study in a group of lignicolous Basidiomycetes, Phellinus s.l. Mycologia 96:799–811.
  18. ———, Edwards J, Cunnington JH, Pascoe IG. 2005. Basidiomycetous pathogens on grapevine: a new species from Australia—Fomitiporia australiensis. Mycotaxon 92:85–96.
  19. Gilbert SG, Ferrer A, Carranza J. 2002. Polypore fungal diversity and host density in a moist tropical forest. Biodivers Conserv 11:947–957.
  20. Gilbertson RL, Ryvarden L. 1987. North American Poly-pores 2. Megasporoporia-Wrightoporia. Oslo, Norway: FungiFlora. p 433–885.
  21. Härkönen M, Niemelä T, Mwasumbi L. 2003. Tanzanian mushroom—edible, harmful and other fungi. Helsinki: Botanical Museum, Finnish Museum of Natural History. 200 p.
  22. Hedberg O. 1970. Evolution of the Afroalpine flora. Biotropica 2:16–23.
  23. Ipulet P. 2007. Ecology and diversity of pore fungi (Aphyllophorales) in Bwindi Impenetrable and Kibale National parks, Albertine Rift, Western Uganda [Doctoral dissertation]. Kampala, Uganda: Makerere Univ Press.
  24. Kerfoot O. 1975. Origin and speciation of the Cupressaceae in sub-Sahara Africa. Boissiera 24:145–150.
  25. Kirk PM, Cannon PF, David JC, Stalpers JA. 2001. Ainsworth & Bisby’s Dictionary of the Fungi. 9th ed. Wallinford, UK: CABI Publishing. 655 p.
  26. Koch M, Kiefer C, Ehrich D, Vogel J, Brochmann C, Mummenhoff K. 2006. Three times out of Asia Minor: the phylogeography of Arabis alpina L (Brassicaceae). Mol Ecol 15:825–839.
  27. Kornerup A, Wanscher JH. 1981. Methuen handbook of color. 3rd ed. 282 p.
  28. Lutzoni F, Kauff F, Cox CJ, McLaughlin D, Celio G, Dentinger B, Padamsee M, Hibbett D, James TY, Baloch E, Grube M, Reeb V, Hofstetter V, Schoch C, Arnold AE, Miadlikowska J, Spatafora J, Johnson D, Hambleton S, Crockett M, Shoemaker R, Sung G-H, Lücking R, Lumbsch T, O’Donnell K, Binder M, Diederich P, Ertz D, Gueidan C, Hansen K, Harris RC, Hosada K, Lim Y-W, Matheny B, Nishida H, Pfister D, Rogers J, Rossman A, Schmitt I, Sipman H, Stone J, Sugiyama J, Yahr R, Vilgalys R. 2004. Assembling the Fungal Tree of Life: progress, classification and evolution of subcellular traits. Am J Bot 91:1446–1480.
  29. Mason-Gamer RJ, Kellogg EA. 1996. Testing for phylogenetic conflict among molecular datasets in the tribe Triticeae (Gramineae). Syst Biol 45:524–545.
  30. Matheny PB, Wang Z, Binder M, Curtis JM, Lim YW, Nilsson RH, Hughes KW, Petersen RH, Hofstetter V, Ammirati JF, Schoch C, Langer GE, McLaughlin DJ, Wilson AW, Crane PE, Frøslev T, Ge ZW, Kerrigan RW, Slot JC, Vellinga EC, Liang ZL, Aime MC, Baroni TJ, Fischer M, Hosaka K, Matsuura K, Seidl MT, Vaura J, Hibbett DS. 2007. Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi). Mol Phylogenet Evol 43:430–451.
  31. Núñez M, Daniëls PP. 1999. Fungi from the Dja Biosphere Reserve (Cameroon) II. Polypores. Mycotaxon 73:235–246.
  32. ———, Ryvarden L. 2001. East Asian Polypores. Vol. 2. Polyporaceae s. lato. Oslo, Norway: Synopsis Fungorum 14. FungiFlora. p 166–522.
  33. Pieri M, Rivoire B. 2000. Le genre Phellinus. Quelques espèces rares ou critiques en France, avec une clé des espèces du genre Phellinus s.l. signalées en Europe occidentale. Bull Soc Mycol Fr 116:305–331.
  34. Posada D, Crandall KA. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817–818.
  35. Rajchenberg M, Wright JE. 1987. Type studies of Corticiaceae and Polyporaceae (Aphyllophorales) described by C. Spegazzini. Mycologia 79:246–264.
  36. Rambaut A, Drummond AJ. 2007. Tracer v1.4. Available at http://beast.bio.ed.ac.uk/Tracer
  37. Reeb V, Lutzoni F, Roux C. 2004. Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory. Mol Phylogenet Evol 32:1036–1060.
  38. Rehner SA, Buckley E. 2005. A Beauveria phylogeny inferred from nuclear ITS and EF1-a sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97:84–98.
  39. Renvall P, Niemelä T. 1993. Ocotea usambarensis and its fungal decayers in natural stands. Bull Jardin Bot Nat 62:403–414.
  40. Roberts P, Ryvarden L. 2006. Poroid fungi from Korup National Park, Cameroon. Kew Bull 61:55–78.
  41. Ronquist F., Huelsenbeck J. P., MrBayes 3: Bayesian phylogenetic inference under mixed models, 10.1093/bioinformatics/btg180
  42. ———. 2004. Neotropical polypores 1. Synopsis Fungorum 19. Oslo, Norway: FungiFlora. 229 p.
  43. Ryvarden L. 2000. A critical checklist of African Polypores. In: Associazione Micologica Bresadola, ed. 2000, Vicenza, Italy: Micologia duemila. Fundacione Centro Studi Micologici dell A.M.B. p 471–483.
  44. ———, Gilbertson RL. 1994. European Polypores 2. Meripilus-Tyromyces. Synopsis Fungorum 7. Oslo, Norway: FungiFlora. p 392–743.
  45. ———, Johansen I. 1980. A preliminary polypores flora of east Africa. Oslo, Norway: FungiFlora. 636 p.
  46. Simmons MP, Pickett KM, Miya M. 2004. How meaningful are Bayesian support values? Mol Biol Evol 21:188–199.
  47. Smith JMB, Cleef AM. 1988. Composition and origins of the world’s tropicalpine floras. J Biogeogr 15:631–645.
  48. Swofford DL. 2003. PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4. Sunderland, Massachusetts: Sinauer Associates.
  49. Thiers B. [continuously updated]. Index Herbariorum: a global directory ofPUBLIC herbaria and associated staff. New York Botanical Garden’s Virtual Herbarium. http://sweetgum.nybg.org/ih/
  50. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882.
  51. Urcelay C, Robledo G, Rajchenberg M. 2000. Phellinus tabaquilio sp. nov. from Córdoba Mountains, central Argentina. Mycotaxon 76:287–291.
  52. ———. 2006. Ivindo et Mwagna: Eaux noires, forêts vierges et baïs. Libreville, Gabon: Wildlife Conservation Society. 272 p.
  53. Vande weghe JP. 2005. Akanda et Pongara. Plages et mangroves. Libreville, Gabon: Wildlife Conservation Society. 207 p.
  54. ———, ———. 2002. Proceedings toward a natural classification of the worldwide taxa Phellinus and Inonotus s.l. and phylogenetic relationships of allied genera. Mycologia 94:998–1016.
  55. Wagner T, Fischer M. 2001. Natural groups and a revised system for the European poroid Hymenochaetales (Basidiomycota) supported by nLSU rDNA sequence data. Mycol Res 105:773–782.
  56. Wendland J, Kothe E. 1997. Isolation of tef1 encoding translation elongation factor EF1a from the homo-basidiomycete Schizophyllum commune. Mycol Res 101: 798–802.
  57. ———. 1983. The vegetation of Africa, a descriptive memoir to accompany the UNESCO/AETFAT/UNSO Vegetation Map of Africa (3 plates, northwestern Africa, northeastern Africa, and southern Africa, 1 : 5,000,000). Paris: Unesco.
  58. White F. 1979. The Guineo-Congolian region and its relationships to other Phytochoria. Bull J Bot Nat Belgique 49:1–384.
  59. Wright JE, Blumenfeld SN. 1984. New South American species of Phellinus (Hymenochaetaceae). Mycotaxon 21:413–425.