User menu

The Human Ovary and Future of Fertility Assessment in the Post-Genome Era

  • Open access
  • PDF
  • 3.12 M
  1. Wiśniewski Jacek R, Zougman Alexandre, Nagaraj Nagarjuna, Mann Matthias, Universal sample preparation method for proteome analysis, 10.1038/nmeth.1322
  2. Calderón-González, 281 (2016)
  3. Vogel Christine, Marcotte Edward M., Insights into the regulation of protein abundance from proteomic and transcriptomic analyses, 10.1038/nrg3185
  4. Rauniyar Navin, Yates John R., Isobaric Labeling-Based Relative Quantification in Shotgun Proteomics, 10.1021/pr500880b
  5. Upadhyay Rahul D., Balasinor N.H., Kumar Anita V., Sachdeva Geetanjali, Parte Priyanka, Dumasia Kushaan, Proteomics in reproductive biology: Beacon for unraveling the molecular complexities, 10.1016/j.bbapap.2012.10.004
  6. Braga Daniela Paes Almeida Ferreira, Setti Amanda Souza, Lo Turco Edson Guimarães, Cordeiro Fernanda Bertuccez, Cabral Elaine Cristina, Cortezzi Sylvia Sanches, Ono Erika, Figueira Rita Cássia Sávio, Eberlin Marcos Nogueira, Borges Edson, Protein expression in human cumulus cells as an indicator of blastocyst formation and pregnancy success, 10.1007/s10815-016-0800-7
  7. Bianchi L., Gagliardi A., Campanella G., Landi C., Capaldo A., Carleo A., Armini A., De Leo V., Piomboni P., Focarelli R., Bini L., A methodological and functional proteomic approach of human follicular fluid en route for oocyte quality evaluation, 10.1016/j.jprot.2013.02.025
  8. Shen Xiaofang, Liu Xin, Zhu Peng, Zhang Yuhua, Wang Jiahui, Wang Yanwei, Wang Wenting, Liu Juan, Li Ning, Liu Fujun, Proteomic analysis of human follicular fluid associated with successful in vitro fertilization, 10.1186/s12958-017-0277-y
  9. Bianchi Laura, Gagliardi Assunta, Landi Claudia, Focarelli Riccardo, De Leo Vincenzo, Luddi Alice, Bini Luca, Piomboni Paola, Protein pathways working in human follicular fluid: the future for tailored IVF?, 10.1017/erm.2016.4
  10. O'Brien Mauria, The Reciprocal Relationship Between Inflammation and Coagulation, 10.1053/j.tcam.2012.06.003
  11. Jarkovska Karla, Martinkova Jirina, Liskova Lucie, Halada Petr, Moos Jiri, Rezabek Karel, Gadher Suresh Jivan, Kovarova Hana, Proteome Mining of Human Follicular Fluid Reveals a Crucial Role of Complement Cascade and Key Biological Pathways in Women Undergoingin VitroFertilization, 10.1021/pr900802u
  12. Hillmeister P., Persson P. B., The Kallikrein-Kinin system, 10.1111/apha.12007
  13. Goldman Shlomit, MMPS and TIMPS in ovarian physiology and pathophysiology, 10.2741/1409
  14. Horka Petra, Malickova Karin, Jarosova Radka, Janatkova Ivana, Zima Tomas, Kalousova Marta, Matrix metalloproteinases in serum and the follicular fluid of women treated by in vitro fertilization, 10.1007/s10815-012-9853-4
  15. Schlage Pascal, auf dem Keller Ulrich, Proteomic approaches to uncover MMP function, 10.1016/j.matbio.2015.01.003
  16. Wu Lan, Sun Yazhou, Wan Jun, Luan Ting, Cheng Qing, Tan Yong, A proteomic analysis identifies candidate early biomarkers to predict ovarian hyperstimulation syndrome in polycystic ovarian syndrome patients, 10.3892/mmr.2017.6604
  17. Khan G. H., Galazis N., Docheva N., Layfield R., Atiomo W., Overlap of proteomics biomarkers between women with pre-eclampsia and PCOS: a systematic review and biomarker database integration, 10.1093/humrep/deu268
  18. Galazis Nicolas, Docheva Nikolina, Nicolaides Kypros H., Atiomo William, Proteomic Biomarkers of Preterm Birth Risk in Women with Polycystic Ovary Syndrome (PCOS): A Systematic Review and Biomarker Database Integration, 10.1371/journal.pone.0053801
  19. Saudemont Philippe, Quanico Jusal, Robin Yves-Marie, Baud Anna, Balog Julia, Fatou Benoit, Tierny Dominique, Pascal Quentin, Minier Kevin, Pottier Mélissa, Focsa Cristian, Ziskind Michael, Takats Zoltan, Salzet Michel, Fournier Isabelle, Real-Time Molecular Diagnosis of Tumors Using Water-Assisted Laser Desorption/Ionization Mass Spectrometry Technology, 10.1016/j.ccell.2018.09.009
  20. Othman Ziryan, Cillero Pastor Berta, van Rijt Sabine, Habibovic Pamela, Understanding interactions between biomaterials and biological systems using proteomics, 10.1016/j.biomaterials.2018.03.020
  21. Groen Nathalie, Guvendiren Murat, Rabitz Herschel, Welsh William J., Kohn Joachim, de Boer Jan, Stepping into the omics era: Opportunities and challenges for biomaterials science and engineering, 10.1016/j.actbio.2016.02.015
  22. Ouni Emna, Vertommen Didier, Chiti Maria Costanza, Dolmans Marie-Madeleine, Amorim Christiani A., A Draft Map of the Human Ovarian Proteome for Tissue Engineering and Clinical Applications, 10.1074/mcp.ra117.000469
  23. Insenser María, Escobar-Morreale Héctor F, Proteomics and polycystic ovary syndrome, 10.1586/14789450.2013.837665
  24. Chen Fang, Spiessens Carl, D’Hooghe Thomas, Peeraer Karen, Carpentier Sebastien, Follicular fluid biomarkers for human in vitro fertilization outcome: Proof of principle, 10.1186/s12953-016-0106-9
  25. Otsuki Junko, Nagai Yasushi, Matsuyama Yukie, Terada Tomoyoshi, Era Seiichi, The influence of the redox state of follicular fluid albumin on the viability of aspirated human oocytes, 10.3109/19396368.2012.675004
  26. Amorim Christiani A., Special Issue Devoted to a New Field of Regenerative Medicine: Reproductive Tissue Engineering, 10.1007/s10439-017-1862-0
  27. Naba Alexandra, Clauser Karl R., Hynes Richard O., Enrichment of Extracellular Matrix Proteins from Tissues and Digestion into Peptides for Mass Spectrometry Analysis, 10.3791/53057
  28. Wu Christine C., Yates John R., The application of mass spectrometry to membrane proteomics, 10.1038/nbt0303-262
  29. Tabb David L., Quality assessment for clinical proteomics, 10.1016/j.clinbiochem.2012.12.003
  30. Mischak Harald, Apweiler Rolf, Banks Rosamonde E., Conaway Mark, Coon Joshua, Dominiczak Anna, Ehrich Jochen H. H., Fliser Danilo, Girolami Mark, Hermjakob Henning, Hochstrasser Denis, Jankowski Joachim, Julian Bruce A., Kolch Walter, Massy Ziad A., Neusuess Christian, Novak Jan, Peter Karlheinz, Rossing Kasper, Schanstra Joost, Semmes O. John, Theodorescu Dan, Thongboonkerd Visith, Weissinger Eva M., Van Eyk Jennifer E., Yamamoto Tadashi, Clinical proteomics: A need to define the field and to begin to set adequate standards, 10.1002/prca.200600771
  31. Dimitrakopoulos L., Prassas I., Diamandis E. P., Nesvizhskii A., Kislinger T., Jaffe J., Drabovich A., Proteogenomics: Opportunities and Caveats, 10.1373/clinchem.2015.247858
  32. Zhang Bing, Whiteaker Jeffrey R., Hoofnagle Andrew N., Baird Geoffrey S., Rodland Karin D., Paulovich Amanda G., Clinical potential of mass spectrometry-based proteogenomics, 10.1038/s41571-018-0135-7
  33. Lobas Anna A., Pyatnitskiy Mikhail A., Chernobrovkin Alexey L., Ilina Irina Y., Karpov Dmitry S., Solovyeva Elizaveta M., Kuznetsova Ksenia G., Ivanov Mark V., Lyssuk Elena Y., Kliuchnikova Anna A., Voronko Olga E., Larin Sergey S., Zubarev Roman A., Gorshkov Mikhail V., Moshkovskii Sergei A., Proteogenomics of Malignant Melanoma Cell Lines: The Effect of Stringency of Exome Data Filtering on Variant Peptide Identification in Shotgun Proteomics, 10.1021/acs.jproteome.7b00841
  34. Zhang Hui, Liu Tao, Zhang Zhen, Payne Samuel H., Zhang Bai, McDermott Jason E., Zhou Jian-Ying, Petyuk Vladislav A., Chen Li, Ray Debjit, Sun Shisheng, Yang Feng, Chen Lijun, Wang Jing, Shah Punit, Cha Seong Won, Aiyetan Paul, Woo Sunghee, Tian Yuan, Gritsenko Marina A., Clauss Therese R., Choi Caitlin, Monroe Matthew E., Thomas Stefani, Nie Song, Wu Chaochao, Moore Ronald J., Yu Kun-Hsing, Tabb David L., Fenyö David, Bafna Vineet, Wang Yue, Rodriguez Henry, Boja Emily S., Hiltke Tara, Rivers Robert C., Sokoll Lori, Zhu Heng, Shih Ie-Ming, Cope Leslie, Pandey Akhilesh, Zhang Bing, Snyder Michael P., Levine Douglas A., Smith Richard D., Chan Daniel W., Rodland Karin D., Carr Steven A., Gillette Michael A., Klauser Karl R., Kuhn Eric, Mani D.R., Mertins Philipp, Ketchum Karen A., Thangudu Ratna, Cai Shuang, Oberti Mauricio, Paulovich Amanda G., Whiteaker Jeffrey R., Edwards Nathan J., McGarvey Peter B., Madhavan Subha, Wang Pei, Chan Daniel W., Pandey Akhilesh, Shih Ie-Ming, Zhang Hui, Zhang Zhen, Zhu Heng, Cope Leslie, Whiteley Gordon A., Skates Steven J., White Forest M., Levine Douglas A., Boja Emily S., Kinsinger Christopher R., Hiltke Tara, Mesri Mehdi, Rivers Robert C., Rodriguez Henry, Shaw Kenna M., Stein Stephen E., Fenyo David, Liu Tao, McDermott Jason E., Payne Samuel H., Rodland Karin D., Smith Richard D., Rudnick Paul, Snyder Michael, Zhao Yingming, Chen Xian, Ransohoff David F., Hoofnagle Andrew N., Liebler Daniel C., Sanders Melinda E., Shi Zhiao, Slebos Robbert J.C., Tabb David L., Zhang Bing, Zimmerman Lisa J., Wang Yue, Davies Sherri R., Ding Li, Ellis Matthew J.C., Townsend R. Reid, Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer, 10.1016/j.cell.2016.05.069
  35. Wang Jing, Ma Zihao, Carr Steven A., Mertins Philipp, Zhang Hui, Zhang Zhen, Chan Daniel W., Ellis Matthew J. C., Townsend R. Reid, Smith Richard D., McDermott Jason E., Chen Xian, Paulovich Amanda G., Boja Emily S., Mesri Mehdi, Kinsinger Christopher R., Rodriguez Henry, Rodland Karin D., Liebler Daniel C., Zhang Bing, Proteome Profiling Outperforms Transcriptome Profiling for Coexpression Based Gene Function Prediction, 10.1074/mcp.m116.060301
  36. Ruggles Kelly V., Krug Karsten, Wang Xiaojing, Clauser Karl R., Wang Jing, Payne Samuel H., Fenyö David, Zhang Bing, Mani D. R., Methods, Tools and Current Perspectives in Proteogenomics, 10.1074/mcp.mr117.000024
  37. Tang Xiaoning, Huang Yongmei, Lei Jinli, Luo Hui, Zhu Xiao, The single-cell sequencing: new developments and medical applications, 10.1186/s13578-019-0314-y
  38. Li Lin, Guo Fan, Gao Yun, Ren Yixin, Yuan Peng, Yan Liying, Li Rong, Lian Ying, Li Jingyun, Hu Boqiang, Gao Junpeng, Wen Lu, Tang Fuchou, Qiao Jie, Publisher Correction: Single-cell multi-omics sequencing of human early embryos, 10.1038/s41556-018-0166-4
  39. Crinier Adeline, Milpied Pierre, Escalière Bertrand, Piperoglou Christelle, Galluso Justine, Balsamo Anaïs, Spinelli Lionel, Cervera-Marzal Inaki, Ebbo Mikaël, Girard-Madoux Mathilde, Jaeger Sébastien, Bollon Emilie, Hamed Sami, Hardwigsen Jean, Ugolini Sophie, Vély Frédéric, Narni-Mancinelli Emilie, Vivier Eric, High-Dimensional Single-Cell Analysis Identifies Organ-Specific Signatures and Conserved NK Cell Subsets in Humans and Mice, 10.1016/j.immuni.2018.09.009
  40. Couvillion Sneha P., Zhu Ying, Nagy Gabe, Adkins Joshua N., Ansong Charles, Renslow Ryan S., Piehowski Paul D., Ibrahim Yehia M., Kelly Ryan T., Metz Thomas O., New mass spectrometry technologies contributing towards comprehensive and high throughput omics analyses of single cells, 10.1039/c8an01574k
Bibliographic reference Ouni, Emna ; Vertommen, Didier ; Andrade Amorim, Christiani. The Human Ovary and Future of Fertility Assessment in the Post-Genome Era. In: International Journal of Molecular Sciences, Vol. 20, no.17, p. 4209 (2019)
Permanent URL http://hdl.handle.net/2078.1/220372