User menu

Accès à distance en utilisant le proxy de l'UCL :

https://proxy.bib.ucl.ac.be/proxy-dial

archiDART v3.0: A new data analysis pipeline allowing the topological analysis of plant root systems

  • Open access
  • PDF
  • 2.43 M
  1. B Delory, Zenodo. (2017)
  2. B Delory, Zenodo. (2017)
  3. B Delory, Zenodo. (2017)
  4. J Oksanen (2017)
  5. F Husson (2017)
  6. Bodner Gernot, Leitner Daniel, Nakhforoosh Alireza, Sobotik Monika, Moder Karl, Kaul Hans-Peter, A statistical approach to root system classification, 10.3389/fpls.2013.00292
  7. C Sievert (2017)
  8. Wickham Hadley, ggplot2, ISBN:9780387981406, 10.1007/978-0-387-98141-3
  9. W Chang (2017)
  10. Lobet Guillaume, Koevoets Iko T., Noll Manuel, Meyer Patrick E., Tocquin Pierre, Pagès Loïc, Périlleux Claire, Using a Structural Root System Model to Evaluate and Improve the Accuracy of Root Image Analysis Pipelines, 10.3389/fpls.2017.00447
  11. B Fasy (2017)
  12. B Delory, Plant Soil., 398, 351-65 (2016)
  13. Lobet Guillaume, Pound Michael P., Diener Julien, Pradal Christophe, Draye Xavier, Godin Christophe, Javaux Mathieu, Leitner Daniel, Meunier Félicien, Nacry Philippe, Pridmore Tony P., Schnepf Andrea, Root System Markup Language: Toward a Unified Root Architecture Description Language, 10.1104/pp.114.253625
  14. D Leitner, Plant Physiol., 164, 24-35 (2014)
  15. G Lobet, Plant Physiol., 157, 29-39 (2011)
  16. J Le Bot, Plant Soil., 326, 261-73 (2010)
  17. M Pound, Plant Physiol., 162, 1802-14 (2013)
  18. A Schnepf, bioRxiv. (2017)
  19. Pagès Loïc, Bécel Carole, Boukcim Hassan, Moreau Delphine, Nguyen Christophe, Voisin Anne-Sophie, Calibration and evaluation of ArchiSimple, a simple model of root system architecture, 10.1016/j.ecolmodel.2013.11.014
  20. G Lobet, Plant Methods., 9, 38 (2013)
  21. M Li, Am J Bot., 104, 349-353 (2017)
  22. Li Mao, Frank Margaret H, Coneva Viktoriya, Mio Washington, Topp Christopher N, Chitwood Daniel H, Persistent homology: a tool to universally measure plant morphologies across organs and scales, 10.1101/104141
  23. A Fitter, New Phytol., 106, 61-77 (1987)
  24. A Fitter, Ann Bot., 58, 91-101 (1986)
  25. J Lynch, Plant Physiol., 109, 7-13 (1995)
  26. M Balduzzi, Front Plant Sci., 8, 117 (2017)
  27. A Bucksch, Front Plant Sci., 8, 900 (2017)
  28. M Pound, Gigascience., 6, 1-10 (2017)
  29. Fang S., Clark R. T., Zheng Y., Iyer-Pascuzzi A. S., Weitz J. S., Kochian L. V., Edelsbrunner H., Liao H., Benfey P. N., Genotypic recognition and spatial responses by rice roots, 10.1073/pnas.1222821110
  30. P Delaplace, BMC Plant Biol., 15, 195 (2015)
  31. A Das, Plant Methods., 11, 51 (2015)
  32. M Julkowska, Plant Physiol., 166, 1387-402 (2014)
Bibliographic reference Delory, Benjamin M. ; Li, Mao ; Topp, Christopher N. ; Lobet, Guillaume. archiDART v3.0: A new data analysis pipeline allowing the topological analysis of plant root systems. In: F1000Research, Vol. 7, no. 1, p. 22 (2018)
Permanent URL http://hdl.handle.net/2078.1/195970