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Loop-mediated isothermal DNA amplification for asymptomatic malaria detection in challenging field settings: Technical performance and pilot implementation in the Peruvian Amazon.

Bibliographic reference Serra-Casas, Elisa ; Manrique, Paulo ; Ding, Xavier C ; Carrasco-Escobar, Gabriel ; Alava, Freddy ; et. al. Loop-mediated isothermal DNA amplification for asymptomatic malaria detection in challenging field settings: Technical performance and pilot implementation in the Peruvian Amazon.. In: PLoS One, Vol. 12, p. e0185742 [1-19] (2017)
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  1. PLoS medicine, e1000396 (2011)
  2. Tietje Kathleen, Hawkins Kenneth, Clerk Christine, Ebels Kelly, McGray Sarah, Crudder Chris, Okell Lucy, LaBarre Paul, The essential role of infection-detection technologies for malaria elimination and eradication, 10.1016/
  3. Okell Lucy C., Ghani Azra C., Lyons Emily, Drakeley Chris J., Submicroscopic Infection inPlasmodium falciparum–Endemic Populations: A Systematic Review and Meta‐Analysis, 10.1086/644781
  4. Cheng Qin, Cunningham Jane, Gatton Michelle L., Systematic Review of Sub-microscopic P. vivax Infections: Prevalence and Determining Factors, 10.1371/journal.pntd.0003413
  5. McMorrow M.L., Aidoo M., Kachur S.P., Malaria rapid diagnostic tests in elimination settings—can they find the last parasite?, 10.1111/j.1469-0691.2011.03639.x
  6. Cook Jackie, Xu Weiping, Msellem Mwinyi, Vonk Marlotte, Bergström Beatrice, Gosling Roly, Al-Mafazy Abdul-Wahid, McElroy Peter, Molteni Fabrizio, Abass Ali K., Garimo Issa, Ramsan Mahdi, Ali Abdullah, Mårtensson Andreas, Björkman Anders, Mass Screening and Treatment on the Basis of Results of a Plasmodium falciparum-Specific Rapid Diagnostic Test Did Not Reduce Malaria Incidence in Zanzibar, 10.1093/infdis/jiu655
  7. P Schneider, Am J Trop Med Hyg, 76, 470 (2007)
  8. Bousema Teun, Okell Lucy, Felger Ingrid, Drakeley Chris, Asymptomatic malaria infections: detectability, transmissibility and public health relevance, 10.1038/nrmicro3364
  9. Hänscheid Thomas, Grobusch Martin P., How useful is PCR in the diagnosis of malaria?, 10.1016/s1471-4922(02)02348-6
  10. Notomi T., Loop-mediated isothermal amplification of DNA, 10.1093/nar/28.12.e63
  11. Njiru Zablon Kithinji, Loop-Mediated Isothermal Amplification Technology: Towards Point of Care Diagnostics, 10.1371/journal.pntd.0001572
  12. Polley S. D., Mori Y., Watson J., Perkins M. D., Gonzalez I. J., Notomi T., Chiodini P. L., Sutherland C. J., Mitochondrial DNA Targets Increase Sensitivity of Malaria Detection Using Loop-Mediated Isothermal Amplification, 10.1128/jcm.00355-10
  13. Polley S. D., Gonzalez I. J., Mohamed D., Daly R., Bowers K., Watson J., Mewse E., Armstrong M., Gray C., Perkins M. D., Bell D., Kanda H., Tomita N., Kubota Y., Mori Y., Chiodini P. L., Sutherland C. J., Clinical Evaluation of a Loop-Mediated Amplification Kit for Diagnosis of Imported Malaria, 10.1093/infdis/jit183
  14. Lucchi Naomi W., Gaye Marie, Diallo Mammadou Alpha, Goldman Ira F., Ljolje Dragan, Deme Awa Bineta, Badiane Aida, Ndiaye Yaye Die, Barnwell John W., Udhayakumar Venkatachalam, Ndiaye Daouda, Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites, 10.1038/srep36808
  15. Hayashida Kyoko, Kajino Kiichi, Simukoko Humphrey, Simuunza Martin, Ndebe Joseph, Chota Amos, Namangala Boniface, Sugimoto Chihiro, Direct detection of falciparum and non-falciparum malaria DNA from a drop of blood with high sensitivity by the dried-LAMP system, 10.1186/s13071-016-1949-8
  16. Manual of Standard Operating Procedures for malaria LAMP (Foundation for Innovative New Diagnostics, FIND; Eiken Chemicals Co; Hospital for Tropical Diseases, London) [Internet]. 2012.
  17. Marti Hanspeter, Stalder Chris, González Iveth J., Diagnostic accuracy of a LAMP kit for diagnosis of imported malaria in Switzerland, 10.1016/j.tmaid.2014.12.016
  18. Hopkins Heidi, González Iveth J., Polley Spencer D., Angutoko Patrick, Ategeka John, Asiimwe Caroline, Agaba Bosco, Kyabayinze Daniel J., Sutherland Colin J., Perkins Mark D., Bell David, Highly Sensitive Detection of Malaria Parasitemia in a Malaria-Endemic Setting: Performance of a New Loop-Mediated Isothermal Amplification Kit in a Remote Clinic in Uganda, 10.1093/infdis/jit184
  19. Vallejo Andrés F., Martínez Nora L., González Iveth J., Arévalo-Herrera Myriam, Herrera Sócrates, Evaluation of the Loop Mediated Isothermal DNA Amplification (LAMP) Kit for Malaria Diagnosis in P. vivax Endemic Settings of Colombia, 10.1371/journal.pntd.0003453
  20. Cook Jackie, Aydin-Schmidt Berit, González Iveth J, Bell David, Edlund Elin, Nassor Majda H, Msellem Mwinyi, Ali Abdullah, Abass Ali K, Mårtensson Andreas, Björkman Anders, Loop-mediated isothermal amplification (LAMP) for point-of-care detection of asymptomatic low-density malaria parasite carriers in Zanzibar, 10.1186/s12936-015-0573-y
  21. Tegegne Banchamlak, Getie Sisay, Lemma Wossenseged, Mohon Abu Naser, Pillai Dylan R., Performance of loop-mediated isothermal amplification (LAMP) for the diagnosis of malaria among malaria suspected pregnant women in Northwest Ethiopia, 10.1186/s12936-017-1692-4
  22. Morris Ulrika, Khamis Mwinyi, Aydin-Schmidt Berit, Abass Ali K, Msellem Mwinyi I, Nassor Majda H, González Iveth J, Mårtensson Andreas, Ali Abdullah S, Björkman Anders, Cook Jackie, Field deployment of loop-mediated isothermal amplification for centralized mass-screening of asymptomatic malaria in Zanzibar: a pre-elimination setting, 10.1186/s12936-015-0731-2
  23. Rosas-Aguirre Angel, Gamboa Dionicia, Manrique Paulo, Conn Jan E., Moreno Marta, Lescano Andres G., Sanchez Juan F., Rodriguez Hugo, Silva Hermann, Llanos-Cuentas Alejandro, Vinetz Joseph M., Epidemiology of Plasmodium vivax Malaria in Peru , 10.4269/ajtmh.16-0268
  24. Olliaro Piero L., Barnwell John W., Barry Alyssa, Mendis Kamini, Mueller Ivo, Reeder John C., Shanks G. Dennis, Snounou Georges, Wongsrichanalai Chansuda, Implications of Plasmodium vivax Biology for Control, Elimination, and Research , 10.4269/ajtmh.16-0160
  25. Rovira-Vallbona Eduard, Contreras-Mancilla Juan José, Ramirez Roberson, Guzmán-Guzmán Mitchel, Carrasco-Escobar Gabriel, Llanos-Cuentas Alejandro, Vinetz Joseph M., Gamboa Dionicia, Rosanas-Urgell Anna, Predominance of asymptomatic and sub-microscopic infections characterizes the Plasmodium gametocyte reservoir in the Peruvian Amazon, 10.1371/journal.pntd.0005674
  26. Gamboa Dionicia, Ho Mei-Fong, Bendezu Jorge, Torres Katherine, Chiodini Peter L., Barnwell John W., Incardona Sandra, Perkins Mark, Bell David, McCarthy James, Cheng Qin, A Large Proportion of P. falciparum Isolates in the Amazon Region of Peru Lack pfhrp2 and pfhrp3: Implications for Malaria Rapid Diagnostic Tests, 10.1371/journal.pone.0008091
  27. Maltha Jessica, Gamboa Dionicia, Bendezu Jorge, Sanchez Luis, Cnops Lieselotte, Gillet Philippe, Jacobs Jan, Rapid Diagnostic Tests for Malaria Diagnosis in the Peruvian Amazon: Impact of pfhrp2 Gene Deletions and Cross-Reactions, 10.1371/journal.pone.0043094
  28. Chuquiyauri Raul, Paredes Maribel, Peñataro Pablo, Torres Sonia, Marin Silvia, Tenorio Alexander, Brouwer Kimberly C., Abeles Shira, Llanos-Cuentas Alejandro, Gilman Robert H., Kosek Margaret, Vinetz Joseph M., Socio-demographics and the development of malaria elimination strategies in the low transmission setting, 10.1016/j.actatropica.2011.11.003
  29. Rosas-Aguirre Angel, Erhart Annette, Llanos-Cuentas Alejandro, Branch Oralee, Berkvens Dirk, Abatih Emmanuel, Lambert Philippe, Frasso Gianluca, Rodriguez Hugo, Gamboa Dionicia, Sihuincha Moisés, Rosanas-Urgell Anna, D’Alessandro Umberto, Speybroeck Niko, Modelling the potential of focal screening and treatment as elimination strategy for Plasmodium falciparum malaria in the Peruvian Amazon Region, 10.1186/s13071-015-0868-4
  30. (2014)
  31. Branch OraLee, Casapia W Martin, Gamboa Dionicia V, Hernandez Jean N, Alava Freddy F, Roncal Norma, Alvarez Eugenia, Perez Enrique J, Gotuzzo Eduardo, 10.1186/1475-2875-4-27
  32. Guarda Javier Aramburú, Asayag César Ramal, Witzig Richard, Malaria Reemergence in the Peruvian Amazon Region, 10.3201/eid0502.990204
  33. Moreno Marta, Saavedra Marlon P, Bickersmith Sara A, Lainhart William, Tong Carlos, Alava Freddy, Vinetz Joseph M, Conn Jan E, Implications for changes in Anopheles darlingi biting behaviour in three communities in the peri-Iquitos region of Amazonian Peru, 10.1186/s12936-015-0804-2
  34. (2010)
  35. World Health Organization—Malaria Microscopy Quality Assurance Manual. Geneva, 2016. [Internet].
  36. Polley Spencer D, Bell David, Oliver James, Tully Frank, Perkins Mark D, Chiodini Peter L, González Iveth J, The design and evaluation of a shaped filter collection device to sample and store defined volume dried blood spots from finger pricks, 10.1186/s12936-015-0558-x
  37. Haanshuus Christel G, Mohn Stein C, Mørch Kristine, Langeland Nina, Blomberg Bjørn, Hanevik Kurt, A novel, single-amplification PCR targeting mitochondrial genome highly sensitive and specific in diagnosing malaria among returned travellers in Bergen, Norway, 10.1186/1475-2875-12-26
  38. Mangold K. A., Manson R. U., Koay E. S. C., Stephens L., Regner M., Thomson R. B., Peterson L. R., Kaul K. L., Real-Time PCR for Detection and Identification of Plasmodium spp., 10.1128/jcm.43.5.2435-2440.2005
  39. Alexander Neal, Review: analysis of parasite and other skewed counts : Analysis of skewed counts, 10.1111/j.1365-3156.2012.02987.x
  40. Boletín Epidemiológico—Situación epidemiológica de la malaria en el Perú (SE 52–2013) [Internet]. Ministerio de Salud del Perú. 2013. pp. 1088–1097.
  41. Sturrock Hugh J. W., Hsiang Michelle S., Cohen Justin M., Smith David L., Greenhouse Bryan, Bousema Teun, Gosling Roly D., Targeting Asymptomatic Malaria Infections: Active Surveillance in Control and Elimination, 10.1371/journal.pmed.1001467
  42. Esposito Alessandro, Tiffert Teresa, Mauritz Jakob M. A., Schlachter Simon, Bannister Lawrence H., Kaminski Clemens F., Lew Virgilio L., FRET Imaging of Hemoglobin Concentration in Plasmodium falciparum-Infected Red Cells, 10.1371/journal.pone.0003780
  43. Perera Rushini S., Ding Xavier C., Tully Frank, Oliver James, Bright Nigel, Bell David, Chiodini Peter L., Gonzalez Iveth J., Polley Spencer D., Development and clinical performance of high throughput loop-mediated isothermal amplification for detection of malaria, 10.1371/journal.pone.0171126
  44. Aydin-Schmidt Berit, Morris Ulrika, Ding Xavier C., Jovel Irina, Msellem Mwinyi I., Bergman Daniel, Islam Atiqul, Ali Abdullah S., Polley Spencer, Gonzalez Iveth J., Mårtensson Andreas, Björkman Anders, Field Evaluation of a High Throughput Loop Mediated Isothermal Amplification Test for the Detection of Asymptomatic Plasmodium Infections in Zanzibar, 10.1371/journal.pone.0169037
  45. FIND. Negotiated Product Pricing—LoopAmp (LAMP) for TB and Malaria. [Internet].