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Fomitiporia neotropica, a new species from South America evidenced by multilocus phylogenetic analyses

Bibliographic reference de Campos Santana, Marisa ; Decock, Cony ; Borges da Silveira, Rosa Mara ; Robledo, Gerardo ; Amalfi, Mario. Fomitiporia neotropica, a new species from South America evidenced by multilocus phylogenetic analyses. In: Mycological Progress : international journal of fungal sciences, Vol. 13, no. 3, p. 601-615 (2014)
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  1. Amalfi Mario, Decock Cony, Fomitiporia castilloi sp. nov. and multiple clades around F. apiahyna and F. texana in Meso- and South America evidenced by multiloci phylogenetic inferences, 10.3852/11-423
  2. Amalfi Mario, Yombiyeni Prudence, Decock Cony, Fomitiporia in sub-Saharan Africa: morphology and multigene phylogenetic analysis support three new species from the Guineo-Congolian rainforest, 10.3852/09-083
  3. Amalfi M., Raymundo T., Valenzuela R., Decock C., Fomitiporia cupressicola sp. nov., a parasite on Cupressus arizonica, and additional unnamed clades in the southern USA and northern Mexico, determined by multilocus phylogenetic analyses, 10.3852/11-196
  4. Bernicchia A (1990) Polyporaceae s.l. in Italia. Istituto di Patologia Vegetale, Bologna, pp 1–594
  5. Bernicchia A (2005) Polyporaceae s.l. Fungi Europaei 10, ed. Candusso, Italy: pp 1–808
  6. Boulet B (2003) Les champignons des arbres de l'est de l'Amérique du Nord. Les publications du Québec, Québec, pp 1–727
  7. Brazee Nicholas J., Lindner Daniel L., Fraver Shawn, D'Amato Anthony W., Milo Amy M., Wood-inhabiting, polyporoid fungi in aspen-dominated forests managed for biomass in the U.S. Lake States, 10.1016/j.funeco.2012.03.002
  8. Carranza-Morse J (1992) Pore fungi of Costa Rica. II. Mycotaxon 43:351–369
  9. Castresana J., Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis, 10.1093/oxfordjournals.molbev.a026334
  10. Coelho G, Wright JE (1996) Phellinus spinescens sp. nov. on bamboo from South America. Mycotaxon 59:383–387
  11. Coelho G, da Silveira RMB, Guerrero RT, Rajchenberg M (2009) On poroid Hymenochaetales growing on bamboos in Southern Brazil and NE Argentina. Fungal Divers 36:1–8
  12. Dai Y-C (1999) Phellinus sensu lato (Aphyllophorales, Hymenochaetaceae) in East Asia. Acta Bot Fenn 166:1–115
  13. Dai Y-C, Zhang X-Q, Zhou T-S (2001) New and noteworthy species of Hymenochaetaceae from China. Mycosystema 20:16–21
  14. Dai Yu-Cheng, Cui Bao-Kai, Decock Cony, A new species of Fomitiporia (Hymenochaetaceae, Basidiomycota) from China based on morphological and molecular characters, 10.1016/j.mycres.2007.11.020
  15. David A, Rajchenberg M (1985) Pore fungi from French Antilles and Guiana. Mycotaxon 22:285–325
  16. David A, Dequatre B, Fiasson JL (1982) Two new Phellinus with globose, cyanophilous spores. Mycotaxon 14:160–174
  17. Decock C., Bitew A., Castillo G., Fomitiporia tenuis and Fomitiporia aethiopica (Basidiomycetes, Hymenochaetales), two undescribed species from the Ethiopian highlands: taxonomy and phylogeny, 10.3852/mycologia.97.1.121
  18. Decock C., Figueroa S. H., Robledo G., Castillo G., Fomitiporia punctata (Basidiomycota, Hymenochaetales) and its presumed taxonomic synonyms in America: taxonomy and phylogeny of some species from tropical/subtropical areas, 10.3852/mycologia.99.5.733
  19. Domański S (1972) Basidiomycetes: Aphyllophorales. Polyporaceae I. (resupinatae), Mucronoporaceae I (resupinatae). US Department of Agriculture Foreign Scientific Publication, Washington DC
  20. Domański S, Orlos SH, Skirgiello A (1967) Grzyby (Zagwiowate II, Szczeciniakowate II). - Panstwowe Wydawnictwo Naukowe, Poland: pp 1–395 (english translation: 1973 - Fungi: Polyporaceae II (pileatae), Mucronoporaceae II (pilaetae) - U.S. Dep. Commerce, Springfield, USA: pp 1–332)
  21. Fischer Michael, On the species complexes within Phellinus: Fomitiporia revisited, 10.1016/s0953-7562(96)80078-5
  22. Fischer Michael, A new wood-decaying basidiomycete species associated with esca of grapevine: Fomitiporia mediterranea (Hymenochaetales), 10.1007/s11557-006-0029-4
  23. Fischer Michael, Binder Manfred, Species Recognition, Geographic Distribution and Host-Pathogen Relationships: A Case Study in a Group of Lignicolous Basidiomycetes, Phellinus s.l., 10.2307/3762113
  24. Fischer M, Edwards J, Cunnington JH, Pascoe IG (2005) Basidiomycetous pathogens on grapevine: a new species from Australia - Fomitiporia australiensis. Mycotaxon 92:85–96
  25. Frøslev T.G., Matheny P.B., Hibbett D.S., Lower level relationships in the mushroom genus Cortinarius (Basidiomycota, Agaricales): A comparison of RPB1, RPB2, and ITS phylogenies, 10.1016/j.ympev.2005.06.016
  26. Gilbertson RL, Ryvarden L (1987) North American Polypores. Part 2. Megasporoporia – Wrightoporia. Fungiflora, Oslo, pp 433–885
  27. Jahn H (1967) Die resupinaten Phellinus-Arten in Mitteleuropa. Westf Pilzbr 6:37–124
  28. Kirk PM, Cannon PF, David JC, Stalpers JA (2001) Ainsworth & Bisby’s Dictionary of the Fungi, 9th edn. CABI Publishing, Wallingford, pp 1–655
  29. Kornerup A, Wanscher JH (1981) Methuen handbook of color, 3rd Edition, Fletcher & Son Ltd, Great Britain: pp 1–282
  30. Loguercio-Leite C, Wright JE (1991) Contribution to a biogeographical study of the Austro-American xylophilous polypores (Aphyllophorales) from the Santa Catarina Island, SC., Brazil. Mycotaxon 61:161–166
  31. Loguercio-Leite C, Wright JE (1995) The genus Phellinus (Hymenochaetaceae) on the island of Santa Catarina, Brazil. Mycotaxon 54:361–388
  32. Lowe JL (1966) Polyporaceae of North America. The Genus Poria. State University College of Forestry, Syracuse University. Tech Pub 90:1–183
  33. Lutzoni F., Kauff F., Cox C. J., McLaughlin D., Celio G., Dentinger B., Padamsee M., Hibbett D., James T. Y., Baloch E., Grube M., Reeb V., Hofstetter V., Schoch C., Arnold A. E., Miadlikowska J., Spatafora J., Johnson D., Hambleton S., Crockett M., Shoemaker R., Sung G.-H., Lucking R., Lumbsch T., O'Donnell K., Binder M., Diederich P., Ertz D., Gueidan C., Hansen K., Harris R. C., Hosaka K., Lim Y.-W., Matheny B., Nishida H., Pfister D., Rogers J., Rossman A., Schmitt I., Sipman H., Stone J., Sugiyama J., Yahr R., Vilgalys R., Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits, 10.3732/ajb.91.10.1446
  34. Mason-Gamer Roberta J., Kellogg Elizabeth A., Olmstead Richard, Testing for Phylogenetic Conflict Among Molecular Data Sets in the Tribe Triticeae (Gramineae), 10.1093/sysbio/45.4.524
  35. Matheny P. Brandon, Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales), 10.1016/j.ympev.2004.11.014
  36. Miadlikowska J., Lutzoni F., Phylogenetic classification of peltigeralean fungi (Peltigerales, Ascomycota) based on ribosomal RNA small and large subunits, 10.3732/ajb.91.3.449
  37. Moncalvo J.-M., Nilsson R. H., Koster B., Dunham S. M., Bernauer T., Matheny P. B., Porter T. M., Margaritescu S., Weiss M., Garnica S., Danell E., Langer G., Langer E., Larsson E., Larsson K.-H., Vilgalys R., The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods, 10.3852/mycologia.98.6.937
  38. M??ller Kai, SeqState : Primer Design and Sequence Statistics for Phylogenetic DNA Datasets, 10.2165/00822942-200504010-00008
  39. Murrill W (1907) Polyporaceae. N Am Flora 9:1–72
  40. Núñez M, Ryvarden L (2000) East Asian Polypores. Volume I. Synopsis Fungorum 13. Fungiflora, Oslo, pp 1–168
  41. Pieri M, Rivoire B (2000) Le genre Phellinus. Quelques espèces rares ou critiques en France, avec une clé des espèces du genre Phellinus s.l. signalées en Europe occidentale. Bull Soc Mycol Fr 116:305–331
  42. Pilotti M., Gervasi F., Brunetti A., Molecular Identification of Fomitiporia mediterranea and Eutypa lata/Libertella blepharis in Platanus x acerifolia, 10.1111/j.1439-0434.2005.00950.x
  43. Pilotti M, Tizzani L, Brunetti A, Gervasi F, Di Lernia G, Lumia V (2010) Molecular identification of Fomitiporia mediterranea on declining and decayed hazelnut. J Pl Path 92:115–129
  44. Posada D., Crandall K. A., MODELTEST: testing the model of DNA substitution, 10.1093/bioinformatics/14.9.817
  45. Raymundo T, Decock C, Valenzuela R, Amalfi M, Cifuentes J, Pacheco-Mota L (2012) New records of the genus Fomitiporia (Hymenochaetales, Basidiomycota) in Mexico. Rev Mex Biodivers 83:313–328
  46. Reeb Valérie, Lutzoni François, Roux Claude, Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory, 10.1016/j.ympev.2004.04.012
  47. Robert V, Stegehuis G, Stalpers J (2005) The MycoBank engine and related databases.
  48. Ronquist F., Huelsenbeck J. P., MrBayes 3: Bayesian phylogenetic inference under mixed models, 10.1093/bioinformatics/btg180
  49. Ronquist F, Huelsenbeck JP, van der Mark P (2005) MrBayes 3.1 manual. School of Computational Science, Florida State University, Tallahassee
  50. Ryvarden L (1978) The Polyporaceae of North Europe. Volume 2 (Inonotus – Tyromyces), vol 2. Fungiflora, Oslo, pp 219–507
  51. Ryvarden L (1991) Genera of Polypores. Nomenclature and taxonomy. Synopsis Fungorum 5. Fungiflora, Oslo, pp 1–363
  52. Ryvarden L (2004) Neotropical polypores 1. Synopsis Fungorum 19. Fungiflora, Oslo, pp 1–229
  53. Ryvarden L, Gilbertson RL (1994) European polypores 2. Meripilus–Tyromyces. Synopsis Fungorum 7. Fungiflora, Oslo, pp 392–743
  54. Ryvarden L, de Meijer AAR (2002) Studies in Neotropical Polypores 14. New species from the State of Paraná, Brazil. Synopsis Fungorum 15. Fungiflora, Oslo, pp 34–69
  55. Simmons Mark P., Ochoterena Helga, Gaps as Characters in Sequence-Based Phylogenetic Analyses, 10.1093/sysbio/49.2.369
  56. Stamatakis Alexandros, Hoover Paul, Rougemont Jacques, Renner Susanne, A Rapid Bootstrap Algorithm for the RAxML Web Servers, 10.1080/10635150802429642
  57. Swofford DL (2003) PAUP*. Phylogenetic analysis using parsimony (*and Other Methods). Version 4. Sinauer Associates, Sunderland
  58. Untereiner WA, Bonjean B, Decock C, Evrard P, de Frahan MH, Jamin N, Massart L, Nélissen L, Robert V, Bosschaerts M, Guissart F, De Brabandere J (1998) MUCL Catalogue of strains (Fungi-Yeast), 3eth edn. Published by the Belgian Office for Scientific, Technical and Cultural Affairs, Brussels
  59. Vlasák Josef, Kout Jiří, Pileate Fomitiporia species in the USA. New combinations Fomitiporia calkinsii and F. bakeri, 10.1007/s11557-010-0715-0
  60. Vlasák J., Kout J., Vlasák J., Ryvarden L., New records of polypores from southern Florida, 10.5248/118.159
  61. Wright JE, Blumenfeld SN (1984) New South American species of Phellinus (Hymenochaetaceae). Mycotaxon 21:413–425
  62. Zhou Li-Wei, Xue Hui-Jun, Fomitiporia pentaphylacis and F. tenuitubus spp. nov. (Hymenochaetales, Basidiomycota) from Guangxi, southern China, 10.1007/s11557-012-0806-1