User menu

Genetic and morphological divergences in the cosmopolitan deep-sea amphipod eurythenes gryllus reveal a diverse abyss and a bipolar species

Bibliographic reference Havermans, Charlotte ; Sonet, Gontran ; d’Udekem d’Acoz, Cedric ; Nagy, Zoltan, T. ; Martin, Patrick ; et. al. Genetic and morphological divergences in the cosmopolitan deep-sea amphipod eurythenes gryllus reveal a diverse abyss and a bipolar species. In: PLoS One, Vol. 8, no. 9, p. e74218 (2013)
Permanent URL
  1. Corfield R (2003) The Silent Landscape: The Scientific Voyage of HMS “Challenger”. Washington: National Academy Press. 304 p.
  2. R Hessler, Deep-Sea Res, 14, 65 (1967)
  3. Etter Ron J., Grassle J. Frederick, Patterns of species diversity in the deep sea as a function of sediment particle size diversity, 10.1038/360576a0
  4. Grassle J. Frederick, Maciolek Nancy J., Deep-Sea Species Richness: Regional and Local Diversity Estimates from Quantitative Bottom Samples, 10.1086/285329
  5. Brandt Angelika, Gooday Andrew J., Brandão Simone N., Brix Saskia, Brökeland Wiebke, Cedhagen Tomas, Choudhury Madhumita, Cornelius Nils, Danis Bruno, De Mesel Ilse, Diaz Robert J., Gillan David C., Ebbe Brigitte, Howe John A., Janussen Dorte, Kaiser Stefanie, Linse Katrin, Malyutina Marina, Pawlowski Jan, Raupach Michael, Vanreusel Ann, First insights into the biodiversity and biogeography of the Southern Ocean deep sea, 10.1038/nature05827
  6. FJ Madsen, Galathea Rep, 4, 177 (1961)
  7. Paterson G.L.J., Lambshead P.J.D., Bathymetric patterns of polychaete diversity in the Rockall Trough, northeast Atlantic, 10.1016/0967-0637(95)00041-4
  8. Etter RonJ., Rex Michael A., Chase Michael R., Quattro Joseph M., POPULATION DIFFERENTIATION DECREASES WITH DEPTH IN DEEP-SEA BIVALVES, 10.1111/j.0014-3820.2005.tb01797.x
  9. Rex MA, Etter RJ (2010) Deep-sea biodiversity: pattern and scale. Cambridge, MA: Harvard University Press. 199–240.
  10. A Brandt, Pol Polar Res, 33, 139 (2012)
  11. France S. C., Genetic population structure and gene flow among deep-sea amphipods,Abyssorchomene spp., from six California Continental Borderland basins, 10.1007/bf00699220
  12. France S. C., Kocher T. D., Geographic and bathymetric patterns of mitochondrial 16S rRNA sequence divergence among deep-sea amphipods, Eurythenes gryllus, 10.1007/bf00351330
  13. Etter Ron J., Rex Michael A., Chase Michael C., Quattro Joseph M., A genetic dimension to deep-sea biodiversity, 10.1016/s0967-0637(98)00100-9
  14. Raupach Michael J., Wägele Johann-Wolfgang, Distinguishing cryptic species in Antarctic Asellota (Crustacea: Isopoda) - a preliminary study of mitochondrial DNA in Acanthaspidia drygalskii , 10.1017/s0954102006000228
  15. ZARDUS JOHN D., ETTER RON J., CHASE MICHAEL R., REX MICHAEL A., BOYLE ELIZABETH E., Bathymetric and geographic population structure in the pan-Atlantic deep-sea bivalve Deminucula atacellana (Schenck, 1939) : GENETIC STRUCTURE IN A DEEP-SEA BIVALVE, 10.1111/j.1365-294x.2005.02832.x
  16. Raupach Michael J., Malyutina Marina, Brandt Angelika, Wägele Johann-Wolfgang, Molecular data reveal a highly diverse species flock within the munnopsoid deep-sea isopod Betamorpha fusiformis (Barnard, 1920) (Crustacea: Isopoda: Asellota) in the Southern Ocean, 10.1016/j.dsr2.2007.07.009
  17. S Brix, Zootaxa, 2838, 79 (2011)
  18. JL Barnard, Galathea Rep, 5, 23 (1961)
  19. Bowman Thomas E., Manning Raymond B., Two Arctic Bathyal Crustaceans: the Shrimp Bythocaris Cryonesus New Species, and the Amphipod Eurythenes Gryllus, With in Situ Photographs From Ice Island T-3, 10.1163/156854072x00363
  20. Thurston Michael H., Petrillo Mario, Della Croce Norberto, Population structure of the necrophagous amphipod Eurythenes gryllus (Amphipoda: Gammaridea) from the Atacama Trench (south-east Pacific Ocean), 10.1017/s0025315402005374
  21. H Stoddart, fam.) Zoosystema, 26, 425 (2004)
  22. Premke Katrin, Muyakshin Sergej, Klages Michael, Wegner Jan, Evidence for long-range chemoreceptive tracking of food odour in deep-sea scavengers by scanning sonar data, 10.1016/s0022-0981(02)00533-6
  23. Takeuchi I, Watanabe K, Respiration rate and swimming speed of the necrophagous amphipod Eurythenes gryllus from Antarctic deep waters, 10.3354/meps163285
  24. Ingram Camilla L., Hessler Robert R., Distribution and behavior of scavenging amphipods from the central North Pacific, 10.1016/0198-0149(83)90017-1
  25. BT Hargrave, 32, 443 (1985)
  26. Premke K, Klages M, Arntz WE, Aggregations of Arctic deep-sea scavengers at large food falls: temporal distribution, consumption rates and population structure, 10.3354/meps325121
  27. Blankenship Lesley E., Levin Lisa A., Extreme food webs: Foraging strategies and diets of scavenging amphipods from the ocean’s deepest 5 kilometers, 10.4319/lo.2007.52.4.1685
  28. K Premke, Vie et Milieu – Life and Environment, 59, 251 (2009)
  29. Thoen Hanne H., Johnsen Geir, Berge Jørgen, Pigmentation and spectral absorbance in the deep-sea arctic amphipods Eurythenes gryllus and Anonyx sp., 10.1007/s00300-010-0861-5
  30. Smith K.L., Baldwin R.J., Vertical distribution of the necrophagous amphipod, Eurythenes gryllus, in the North Pacific: spatial and temporal variation, 10.1016/0198-0149(84)90057-8
  31. Ingram Camilla L., Hessler Robert R., Population biology of the deep-sea amphipod Eurythenes gryllus: inferences from instar analyses, 10.1016/0198-0149(87)90090-2
  32. Christiansen B, Pfannkuche O, Thiel H, Vertical distribution and population structure of the necrophagous amphipod Eurythenes gryllus in the West European Basin , 10.3354/meps066035
  33. Blankenship Lesley E., Yayanos A. Aristides, Cadien Donald B., Levin Lisa A., Vertical zonation patterns of scavenging amphipods from the Hadal zone of the Tonga and Kermadec Trenches, 10.1016/j.dsr.2005.09.006
  34. Bucklin Ann, Wilson Raymond R., Smith Kenneth L., Genetic differentiation of seamount and basin populations of the deep-sea amphipod Eurythenes gryllus, 10.1016/0198-0149(87)90054-9
  35. SC France, Mol Mar Biol Biotechnol, 5, 304 (1996)
  36. E Escobar-Briones, Revista Mexicana de Biodiversidad, 81, 177 (2010)
  37. SMITH C, DELEO F, BERNARDINO A, SWEETMAN A, ARBIZU P, Abyssal food limitation, ecosystem structure and climate change, 10.1016/j.tree.2008.05.002
  38. AR Senna, Nauplius, 17, 81 (2009)
  39. O Folmer, Mol Mar Biol Biotechnol, 3, 294 (1994)
  40. SR Palumbi, Mol Mar Biol Biotechnol, 1, 27 (1991)
  41. Hou Zhonge, Fu Jinzhong, Li Shuqiang, A molecular phylogeny of the genus Gammarus (Crustacea: Amphipoda) based on mitochondrial and nuclear gene sequences, 10.1016/j.ympev.2007.06.006
  42. Havermans Charlotte, Nagy Zoltán T., Sonet Gontran, De Broyer Claude, Martin Patrick, Incongruence between molecular phylogeny and morphological classification in amphipod crustaceans: A case study of Antarctic lysianassoids, 10.1016/j.ympev.2009.10.025
  43. K Katoh, Nucleic Acids Res, 33, 511 (2002)
  44. Katoh Kazutaka, Toh Hiroyuki, Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework, 10.1186/1471-2105-9-212
  45. Swofford DL (2002) PAUP*. Phylogenetic analysis using parsimony (*and other methods). Sinuaer & Associates Inc, Sunderland, Massachusetts.
  46. Posada D., jModelTest: Phylogenetic Model Averaging, 10.1093/molbev/msn083
  47. Schwarz Gideon, Estimating the Dimension of a Model, 10.1214/aos/1176344136
  48. Ronquist F., Huelsenbeck J. P., MrBayes 3: Bayesian phylogenetic inference under mixed models, 10.1093/bioinformatics/btg180
  49. Clement M., Posada D., Crandall K. A., TCS: a computer program to estimate gene genealogies, 10.1046/j.1365-294x.2000.01020.x
  50. Hebert P. D. N., Cywinska A., Ball S. L., deWaard J. R., Biological identifications through DNA barcodes, 10.1098/rspb.2002.2218
  51. Kimura Motoo, A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences, 10.1007/bf01731581
  52. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S., MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods, 10.1093/molbev/msr121
  53. Collins Rupert A., Boykin Laura M., Cruickshank Robert H., Armstrong Karen F., Barcoding's next top model: an evaluation of nucleotide substitution models for specimen identification : Model selection in DNA barcoding, 10.1111/j.2041-210x.2011.00176.x
  54. Havermans C., Nagy Z.T., Sonet G., De Broyer C., Martin P., DNA barcoding reveals new insights into the diversity of Antarctic species of Orchomene sensu lato (Crustacea: Amphipoda: Lysianassoidea), 10.1016/j.dsr2.2010.09.028
  55. Pons Joan, Barraclough Timothy G., Gomez-Zurita Jesus, Cardoso Anabela, Duran Daniel P., Hazell Steaphan, Kamoun Sophien, Sumlin William D., Vogler Alfried P., Hedin Marshal, Sequence-Based Species Delimitation for the DNA Taxonomy of Undescribed Insects, 10.1080/10635150600852011
  56. Monaghan Michael T., Wild Ruth, Elliot Miranda, Fujisawa Tomochika, Balke Michael, Inward Daegan J.G., Lees David C., Ranaivosolo Ravo, Eggleton Paul, Barraclough Timothy G., Vogler Alfried P., Accelerated Species Inventory on Madagascar Using Coalescent-Based Models of Species Delineation, 10.1093/sysbio/syp027
  57. Birky C. William, Wolf Cynthia, Maughan Heather, Herbertson Linnea, Henry Elena, Speciation and Selection without Sex, 10.1007/s10750-005-4097-2
  58. BAIRD HELENA P., MILLER KAREN J., STARK JONATHAN S., Evidence of hidden biodiversity, ongoing speciation and diverse patterns of genetic structure in giant Antarctic amphipods : GENETIC DIVERSITY IN ANTARCTIC AMPHIPODS, 10.1111/j.1365-294x.2011.05173.x
  59. Held C (2003) Molecular evidence for cryptic speciation within the widespread Antarctic crustacean Ceratoserolis trilobitoides (Crustacea, Isopoda). In: Huiskes AHL, Gieskes WWC, Rozema J, et al.., editors. Antarctic biology in a global context. Leiden, The Netherlands: Backhuys Publishers, 135–139.
  60. Kanzaki Natsumi, Giblin-Davis Robin M., Scheffrahn Rudolf H., Taki Hisatomo, Esquivel Alejandro, Davies Kerrie A., Herre E. Allen, Reverse Taxonomy for Elucidating Diversity of Insect-Associated Nematodes: A Case Study with Termites, 10.1371/journal.pone.0043865
  61. Pawlowski Jan, Majewski Wojciech, Longet David, Guiard Jackie, Cedhagen Tomas, Gooday Andrew J., Korsun Sergey, Habura Andrea A., Bowser Samuel S., Genetic differentiation between Arctic and Antarctic monothalamous foraminiferans, 10.1007/s00300-008-0459-3
  62. Uriz Maria-J., Gili Josep-Maria, Orejas Covadonga, Perez-Porro Alicia-R., Do bipolar distributions exist in marine sponges? Stylocordyla chupachups sp. nv. (Porifera: Hadromerida) from the Weddell Sea (Antarctic), previously reported as S. borealis (Lovén, 1868), 10.1007/s00300-010-0876-y
  63. Hunt Brian, Strugnell Jan, Bednarsek Nina, Linse Katrin, Nelson R. John, Pakhomov Evgeny, Seibel Brad, Steinke Dirk, Würzberg Laura, Poles Apart: The “Bipolar” Pteropod Species Limacina helicina Is Genetically Distinct Between the Arctic and Antarctic Oceans, 10.1371/journal.pone.0009835
  64. Kuklinski P, Barnes DKA, First bipolar benthic brooder, 10.3354/meps08446
  65. Brinkmeyer R., Knittel K., Jurgens J., Weyland H., Amann R., Helmke E., Diversity and Structure of Bacterial Communities in Arctic versus Antarctic Pack Ice, 10.1128/aem.69.11.6610-6619.2003
  66. Bano N., Ruffin S., Ransom B., Hollibaugh J. T., Phylogenetic Composition of Arctic Ocean Archaeal Assemblages and Comparison with Antarctic Assemblages, 10.1128/aem.70.2.781-789.2004
  67. PAWLOWSKI J., FAHRNI J., LECROQ B., LONGET D., CORNELIUS N., EXCOFFIER L., CEDHAGEN T., GOODAY A. J., Bipolar gene flow in deep-sea benthic foraminifera : POPULATION GENETICS OF DEEP-SEA FORAMINIFERA, 10.1111/j.1365-294x.2007.03465.x
  68. Mantyla Arnold W., Reid Joseph L., Abyssal characteristics of the World Ocean waters, 10.1016/0198-0149(83)90002-x
  69. Crame J. A., Bipolar Molluscs and Their Evolutionary Implications, 10.2307/2845668
  70. Menzel Lena, George Kai Horst, Arbizu Pedro Martínez, Submarine ridges do not prevent large-scale dispersal of abyssal fauna: A case study of Mesocletodes (Crustacea, Copepoda, Harpacticoida), 10.1016/j.dsr.2011.05.008
  71. Miller Karen J., Rowden Ashley A., Williams Alan, Häussermann Vreni, Out of Their Depth? Isolated Deep Populations of the Cosmopolitan Coral Desmophyllum dianthus May Be Highly Vulnerable to Environmental Change, 10.1371/journal.pone.0019004
  72. J. Quattro, M. Chase, M. Rex, T. Greig, R. Etter, Extreme mitochondrial DNA divergence within populations of the deep-sea gastropod Frigidoalvania brychia, 10.1007/s002270100662
  73. Schüller Myriam, Evidence for a role of bathymetry and emergence in speciation in the genus Glycera (Glyceridae, Polychaeta) from the deep Eastern Weddell Sea, 10.1007/s00300-010-0913-x
  74. Howell Kerry L., Rogers Alex D., Tyler Paul A., Billett David S. M., Reproductive isolation among morphotypes of the Atlantic seastar species Zoroaster fulgens (Asteroidea: Echinodermata), 10.1007/s00227-003-1248-8
  75. Kojima S, Segawa R, Hayashi I, Okiyama M, Phylogeography of a deep-sea demersal fish, Bothrocara hollandi, in the Japan Sea, 10.3354/meps217135
  76. Lörz Anne-Nina, Linse Katrin, Smith Peter J., Steinke Dirk, First Molecular Evidence for Underestimated Biodiversity of Rhachotropis (Crustacea, Amphipoda), with Description of a New Species, 10.1371/journal.pone.0032365
  77. Altabet Mark A., Deuser Werner G., Honjo Susumu, Stienen Christian, Seasonal and depth-related changes in the source of sinking particles in the North Atlantic, 10.1038/354136a0
  78. Rex MA (1983) Geographic patterns of species diversity in the deep-sea benthos. In: Rowe GT, editor. The sea. New York: Wiley 453–472.
  79. Somero G N, Adaptations to High Hydrostatic Pressure, 10.1146/
  80. Duffy G. A., Horton T., Billett D. S. M., Deep-sea scavenging amphipod assemblages from the submarine canyons of the Iberian Peninsula, 10.5194/bgd-9-7831-2012
  81. Laakmann Silke, Auel Holger, Kochzius Marc, Evolution in the deep sea: Biological traits, ecology and phylogenetics of pelagic copepods, 10.1016/j.ympev.2012.07.007
  82. A Brown, Biogeosciences Discuss, 9, C1 (2012)
  83. Brown Alastair, Thatje Sven, Respiratory Response of the Deep-Sea Amphipod Stephonyx biscayensis Indicates Bathymetric Range Limitation by Temperature and Hydrostatic Pressure, 10.1371/journal.pone.0028562
  84. Jamieson A.J., Kilgallen N.M., Rowden A.A., Fujii T., Horton T., Lörz A.-N., Kitazawa K., Priede I.G., Bait-attending fauna of the Kermadec Trench, SW Pacific Ocean: Evidence for an ecotone across the abyssal–hadal transition zone, 10.1016/j.dsr.2010.11.003
  85. Kaiser Stefanie, Barnes David K.A., Brandt Angelika, Slope and deep-sea abundance across scales: Southern Ocean isopods show how complex the deep sea can be, 10.1016/j.dsr2.2007.07.006