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Mechanism of competence activation by the ComRS signalling system in streptococci

Bibliographic reference Fontaine, Laetitia ; Goffin, Philippe ; Dubout, Hélène ; Delplace, Brigitte ; Baulard, Alain ; et. al. Mechanism of competence activation by the ComRS signalling system in streptococci. In: Molecular Microbiology, Vol. 87, no.6, p. 1113-1132 (2013)
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  1. Allan Elaine, Hussain Haitham A., Crawford Kevin R., Miah Shahjahan, Ascott Zoë K., Khwaja Mahrukh H., Hosie Arthur H.F., Genetic variation incomC, the gene encoding competence-stimulating peptide (CSP) inStreptococcus mutans, 10.1111/j.1574-6968.2006.00593.x
  2. Aravind L., Anantharaman Vivek, Balaji Santhanam, Babu M. Mohan, Iyer Lakshminarayan M., The many faces of the helix-turn-helix domain: Transcription regulation and beyond, 10.1016/j.fmrre.2004.12.008
  3. BELLOQUE JOSEFINA, RAMOS MERCEDES, Determination of the casein content in bovine milk by 31P-NMR, 10.1017/s0022029902005630
  4. Berg K. H., Biornstad T. J., Straume D., Havarstein L. S., Peptide-Regulated Gene Depletion System Developed for Use in Streptococcus pneumoniae, 10.1128/jb.05170-11
  5. Blomqvist T., Steinmoen H., Havarstein L. S., Natural Genetic Transformation: a Novel Tool for Efficient Genetic Engineering of the Dairy Bacterium Streptococcus thermophilus, 10.1128/aem.01156-06
  6. Bouillaut L., Perchat S., Arold S., Zorrilla S., Slamti L., Henry C., Gohar M., Declerck N., Lereclus D., Molecular basis for group-specific activation of the virulence regulator PlcR by PapR heptapeptides, 10.1093/nar/gkn149
  7. Boutry C., Wahl A., Delplace B., Clippe A., Fontaine L., Hols P., Adaptor Protein MecA Is a Negative Regulator of the Expression of Late Competence Genes in Streptococcus thermophilus, 10.1128/jb.06800-11
  8. Browning Douglas F., Busby Stephen J. W., The regulation of bacterial transcription initiation, 10.1038/nrmicro787
  9. Carrolo Margarida, Pinto Francisco R, Melo-Cristino Jose, Ramirez Mario, Pherotypes are driving genetic differentiation within Streptococcus pneumoniae, 10.1186/1471-2180-9-191
  10. Chang Jennifer C., LaSarre Breah, Jimenez Juan C., Aggarwal Chaitanya, Federle Michael J., Two Group A Streptococcal Peptide Pheromones Act through Opposing Rgg Regulators to Control Biofilm Development, 10.1371/journal.ppat.1002190
  11. Claverys Jean-Pierre, Martin Bernard, Bacterial ‘competence’ genes: signatures of active transformation, or only remnants?, 10.1016/s0966-842x(03)00064-7
  12. Claverys Jean-Pierre, Prudhomme Marc, Martin Bernard, Induction of Competence Regulons as a General Response to Stress in Gram-Positive Bacteria, 10.1146/annurev.micro.60.080805.142139
  13. Courtin P., Monnet V., Rul F., Cell-wall proteinases PrtS and PrtB have a different role in Streptococcus thermophilus/Lactobacillus bulgaricus mixed cultures in milk, 10.1099/00221287-148-11-3413
  14. Declerck N., Bouillaut L., Chaix D., Rugani N., Slamti L., Hoh F., Lereclus D., Arold S. T., Structure of PlcR: Insights into virulence regulation and evolution of quorum sensing in Gram-positive bacteria, 10.1073/pnas.0704501104
  15. Delorme C., Bartholini C., Bolotine A., Ehrlich S. D., Renault P., Emergence of a Cell Wall Protease in the Streptococcus thermophilus Population, 10.1128/aem.01018-09
  16. Desai K., Mashburn-Warren L., Federle M. J., Morrison D. A., Development of Competence for Genetic Transformation of Streptococcus mutans in a Chemically Defined Medium, 10.1128/jb.00337-12
  17. Dower W. J., Miller J. F., Ragsdale C. W., High efficiency transformation of E.coli by high voltage electroporation, 10.1093/nar/16.13.6127
  18. Eng Catherine, Thibessard Annabelle, Danielsen Morten, Rasmussen Thomas Bovbjerg, Mari Jean-François, Leblond Pierre, In silico prediction of horizontal gene transfer in Streptococcus thermophilus, 10.1007/s00203-010-0671-8
  19. Engohang-Ndong Jean, Baillat David, Aumercier Marc, Bellefontaine Flore, Besra Gurdyal S., Locht Camille, Baulard Alain R., EthR, a repressor of the TetR/CamR family implicated in ethionamide resistance in mycobacteria, octamerizes cooperatively on its operator : Regulation of ethionamide resistance in mycobacteria, 10.1046/j.1365-2958.2003.03809.x
  20. Ferain T, Hobbs J N, Richardson J, Bernard N, Garmyn D, Hols P, Allen N E, Delcour J, Knockout of the two ldh genes has a major impact on peptidoglycan precursor synthesis in Lactobacillus plantarum., 10.1128/jb.178.18.5431-5437.1996
  21. Fleuchot B., Gitton C., Guillot A., Vidic J., Nicolas P., Besset C., Fontaine L., Hols P., Leblond-Bourget N., Monnet V., Gardan R., Rgg proteins associated with internalized small hydrophobic peptides: a new quorum-sensing mechanism in streptococci : SHP/Rgg quorum-sensing mechanism in streptococci, 10.1111/j.1365-2958.2011.07633.x
  22. Fontaine L., Boutry C., de Frahan M. H., Delplace B., Fremaux C., Horvath P., Boyaval P., Hols P., A Novel Pheromone Quorum-Sensing System Controls the Development of Natural Competence in Streptococcus thermophilus and Streptococcus salivarius, 10.1128/jb.01251-09
  23. Fontaine L., Boutry C., Guedon E., Guillot A., Ibrahim M., Grossiord B., Hols P., Quorum-Sensing Regulation of the Production of Blp Bacteriocins in Streptococcus thermophilus, 10.1128/jb.00966-07
  24. Fontaine L., Dandoy D., Boutry C., Delplace B., de Frahan M. H., Fremaux C., Horvath P., Boyaval P., Hols P., Development of a Versatile Procedure Based on Natural Transformation for Marker-Free Targeted Genetic Modification in Streptococcus thermophilus, 10.1128/aem.01671-10
  25. Fouquier d’Hérouel Aymeric, Wessner Françoise, Halpern David, Ly-Vu Joseph, Kennedy Sean P., Serror Pascale, Aurell Erik, Repoila Francis, A simple and efficient method to search for selected primary transcripts: non-coding and antisense RNAs in the human pathogen Enterococcus faecalis, 10.1093/nar/gkr012
  26. Gardan R., Besset C., Guillot A., Gitton C., Monnet V., The Oligopeptide Transport System Is Essential for the Development of Natural Competence in Streptococcus thermophilus Strain LMD-9, 10.1128/jb.00257-09
  27. Guiral S., Mitchell T. J., Martin B., Claverys J.-P., From The Cover: Competence-programmed predation of noncompetent cells in the human pathogen Streptococcus pneumoniae: Genetic requirements, 10.1073/pnas.0500879102
  28. Hardiman Timo, Meinhold Hannes, Hofmann Johannes, Ewald Jennifer C., Siemann-Herzberg Martin, Reuss Matthias, Prediction of kinetic parameters from DNA-binding site sequences for modeling global transcription dynamics in Escherichia coli, 10.1016/j.ymben.2009.10.006
  29. Håvarstein Leiv Sigve, Increasing competence in the genus Streptococcus : Competence in the genus Streptococcus, 10.1111/j.1365-2958.2010.07380.x
  30. Håvarstein L S, Hakenbeck R, Gaustad P, Natural competence in the genus Streptococcus: evidence that streptococci can change pherotype by interspecies recombinational exchanges., 10.1128/jb.179.21.6589-6594.1997
  31. Hols, FEMS Microbiol Rev, 29, 435 (2005)
  32. Ibrahim M., Nicolas P., Bessieres P., Bolotin A., Monnet V., Gardan R., A genome-wide survey of short coding sequences in streptococci, 10.1099/mic.0.2007/006205-0
  33. Johnsborg Ola, Eldholm Vegard, Håvarstein Leiv Sigve, Natural genetic transformation: prevalence, mechanisms and function, 10.1016/j.resmic.2007.09.004
  34. Khan R., Rukke H. V., Ricomini Filho A. P., Fimland G., Arntzen M. O., Thiede B., Petersen F. C., Extracellular Identification of a Processed Type II ComR/ComS Pheromone of Streptococcus mutans, 10.1128/jb.00624-12
  35. Kreth Jens, Merritt Justin, Shi Wenyuan, Qi Fengxia, Co-ordinated bacteriocin production and competence development: a possible mechanism for taking up DNA from neighbouring species : Co-ordinated bacteriocin production and competence development, 10.1111/j.1365-2958.2005.04695.x
  36. Lambin Michaël, Nicolas Emilien, Oger Cédric A., Nguyen Nathan, Prozzi Deborah, Hallet Bernard, Separate structural and functional domains of Tn4430 transposase contribute to target immunity : Immunity blind mutants of Tn4430 transposon, 10.1111/j.1365-2958.2012.07967.x
  37. LaSarre B., Aggarwal C., Federle M. J., Antagonistic Rgg Regulators Mediate Quorum Sensing via Competitive DNA Binding in Streptococcus pyogenes, 10.1128/mbio.00333-12
  38. Lee, J Bacteriol, 181, 5004 (1999)
  39. Letort C., Juillard V., Development of a minimal chemically-defined medium for the exponential growth of Streptococcus thermophilus, 10.1046/j.1365-2672.2001.01469.x
  40. Lorenz, Microbiol Rev, 58, 563 (1994)
  41. Maguin E, Prévost H, Ehrlich S D, Gruss A, Efficient insertional mutagenesis in lactococci and other gram-positive bacteria., 10.1128/jb.178.3.931-935.1996
  42. Martin Bernard, Soulet Anne-Lise, Mirouze Nicolas, Prudhomme Marc, Mortier-Barrière Isabelle, Granadel Chantal, Noirot-Gros Marie-Françoise, Noirot Philippe, Polard Patrice, Claverys Jean-Pierre, ComE/ComE∼P interplay dictates activation or extinction status of pneumococcal X-state (competence) : Dual control of earlycompromoters by ComE, 10.1111/mmi.12104
  43. Mashburn-Warren Lauren, Morrison Donald A., Federle Michael J., A novel double-tryptophan peptide pheromone controls competence in Streptococcus spp. via an Rgg regulator : ComRS: proximal regulator of sigX in S. mutans, 10.1111/j.1365-2958.2010.07361.x
  44. Mashburn-Warren L., Morrison D. A., Federle M. J., The Cryptic Competence Pathway in Streptococcus pyogenes Is Controlled by a Peptide Pheromone, 10.1128/jb.00830-12
  45. McClure W R, Mechanism and Control of Transcription Initiation in Prokaryotes, 10.1146/
  46. MDowell Philip, Affas Zina, Reynolds Caroline, Holden Matthew T. G., Wood Stewart J., Saint Sandra, Cockayne Alan, Hill Philip J., Dodd Christine E. R., Bycroft Barrie W., Chan Weng C., Williams Paul, Structure, activity and evolution of the group I thiolactone peptide quorum-sensing system of Staphylococcus aureus : Quorum sensing in S. aureus, 10.1046/j.1365-2958.2001.02539.x
  47. Meisel Hans, Biochemical properties of regulatory peptides derived from mil proteins, 10.1002/(sici)1097-0282(1997)43:2<119::aid-bip4>;2-y
  48. Meisel Hans, Bockelmann Wilhelm, 10.1023/a:1002063805780
  49. Michaylova Michaela, Minkova Svetlana, Kimura Katsunori, Sasaki Takashi, Isawa Kakuhei, Isolation and characterization ofLactobacillus delbrueckiissp.bulgaricusandStreptococcus thermophilusfrom plants in Bulgaria, 10.1111/j.1574-6968.2007.00631.x
  50. Miclo Laurent, Roux Émeline, Genay Magali, Brusseaux Émilie, Poirson Chantal, Jameh Nawara, Perrin Clarisse, Dary Annie, Variability of Hydrolysis of β-, αs1-, and αs2-Caseins by 10 Strains of Streptococcus thermophilus and Resulting Bioactive Peptides, 10.1021/jf202176d
  51. Nishida Keishin, Frith Martin C., Nakai Kenta, Pseudocounts for transcription factor binding sites, 10.1093/nar/gkn1019
  52. Perchat Stéphane, Dubois Thomas, Zouhir Samira, Gominet Myriam, Poncet Sandrine, Lemy Christelle, Aumont-Nicaise Magali, Deutscher Josef, Gohar Michel, Nessler Sylvie, Lereclus Didier, A cell-cell communication system regulates protease production during sporulation in bacteria of the Bacillus cereus group : The NprR-NprX system, 10.1111/j.1365-2958.2011.07839.x
  53. Perego M., A peptide export-import control circuit modulating bacterial development regulates protein phosphatases of the phosphorelay, 10.1073/pnas.94.16.8612
  54. Perez P. F., Dore J., Leclerc M., Levenez F., Benyacoub J., Serrant P., Segura-Roggero I., Schiffrin E. J., Donnet-Hughes A., Bacterial Imprinting of the Neonatal Immune System: Lessons From Maternal Cells?, 10.1542/peds.2006-1649
  55. Qin Junjie, Li Ruiqiang, Raes Jeroen, Arumugam Manimozhiyan, Burgdorf Kristoffer Solvsten, Manichanh Chaysavanh, Nielsen Trine, Pons Nicolas, Levenez Florence, Yamada Takuji, Mende Daniel R., Li Junhua, Xu Junming, Li Shaochuan, Li Dongfang, Cao Jianjun, Wang Bo, Liang Huiqing, Zheng Huisong, Xie Yinlong, Tap Julien, Lepage Patricia, Bertalan Marcelo, Batto Jean-Michel, Hansen Torben, Le Paslier Denis, Linneberg Allan, Nielsen H. Bjørn, Pelletier Eric, Renault Pierre, Sicheritz-Ponten Thomas, Turner Keith, Zhu Hongmei, Yu Chang, Li Shengting, Jian Min, Zhou Yan, Li Yingrui, Zhang Xiuqing, Li Songgang, Qin Nan, Yang Huanming, Wang Jian, Brunak Søren, Doré Joel, Guarner Francisco, Kristiansen Karsten, Pedersen Oluf, Parkhill Julian, Weissenbach Jean, Antolin Maria, Artiguenave François, Blottiere Hervé, Borruel Natalia, Bruls Thomas, Casellas Francesc, Chervaux Christian, Cultrone Antonella, Delorme Christine, Denariaz Gérard, Dervyn Rozenn, Forte Miguel, Friss Carsten, van de Guchte Maarten, Guedon Eric, Haimet Florence, Jamet Alexandre, Juste Catherine, Kaci Ghalia, Kleerebezem Michiel, Knol Jan, Kristensen Michel, Layec Severine, Le Roux Karine, Leclerc Marion, Maguin Emmanuelle, Melo Minardi Raquel, Oozeer Raish, Rescigno Maria, Sanchez Nicolas, Tims Sebastian, Torrejon Toni, Varela Encarna, de Vos Willem, Winogradsky Yohanan, Zoetendal Erwin, Bork Peer, Ehrlich S. Dusko, Wang Jun, A human gut microbial gene catalogue established by metagenomic sequencing, 10.1038/nature08821
  56. Rocha-Estrada Jorge, Aceves-Diez Angel E., Guarneros Gabriel, de la Torre Mayra, The RNPP family of quorum-sensing proteins in Gram-positive bacteria, 10.1007/s00253-010-2651-y
  57. Rul F., Monnet V., Presence of additional peptidases in Streptococcus thermophilus CNRZ 302 compared to Lactococcus lactis, 10.1046/j.1365-2672.1997.00185.x
  58. Sambrook, Molecular Cloning: A Laboratory Manual (1989)
  59. Seaton K., Ahn S.-J., Sagstetter A. M., Burne R. A., A Transcriptional Regulator and ABC Transporters Link Stress Tolerance, (p)ppGpp, and Genetic Competence in Streptococcus mutans, 10.1128/jb.01257-10
  60. Senadheera Dilani, Cvitkovitch Dennis G., Quorum Sensing and Biofilm Formation by Streptococcus mutans, Advances in Experimental Medicine and Biology ISBN:9780387788845 p.178-188, 10.1007/978-0-387-78885-2_12
  61. Shi K., Brown C. K., Gu Z.-Y., Kozlowicz B. K., Dunny G. M., Ohlendorf D. H., Earhart C. A., Structure of peptide sex pheromone receptor PrgX and PrgX/pheromone complexes and regulation of conjugation in Enterococcus faecalis, 10.1073/pnas.0506163102
  62. Slamti L., Lereclus D., Specificity and Polymorphism of the PlcR-PapR Quorum-Sensing System in the Bacillus cereus Group, 10.1128/jb.187.3.1182-1187.2005
  63. Speck C., ATP- and ADP-DnaA protein, a molecular switch in gene regulation, 10.1093/emboj/18.21.6169
  64. Steinmoen H., Knutsen E., Havarstein L. S., Induction of natural competence in Streptococcus pneumoniae triggers lysis and DNA release from a subfraction of the cell population, 10.1073/pnas.112464599
  65. Stormo Gary D., [13] Consensus patterns in DNA, Methods in Enzymology (1990) ISBN:9780121820848 p.211-221, 10.1016/0076-6879(90)83015-2
  66. Wasserman Wyeth W., Sandelin Albin, Applied bioinformatics for the identification of regulatory elements, 10.1038/nrg1315