User menu

Host-pathogen interactome mapping for HTLV-1 and -2 retroviruses.

Bibliographic reference Simonis, Nicolas ; Rual, Jean-François ; Lemmens, Irma ; Boxus, Mathieu ; Hirozane-Kishikawa, Tomoko ; et. al. Host-pathogen interactome mapping for HTLV-1 and -2 retroviruses.. In: Retrovirology, Vol. 9, no.00, p. 26 (2012)
Permanent URL http://hdl.handle.net/2078/121138
  1. Hinuma Y., Nagata K., Hanaoka M., Nakai M., Matsumoto T., Kinoshita K. I., Shirakawa S., Miyoshi I., Adult T-cell leukemia: antigen in an ATL cell line and detection of antibodies to the antigen in human sera., 10.1073/pnas.78.10.6476
  2. Kalyanaraman V., Sarngadharan M., Robert-Guroff M, Miyoshi I, Golde D, Gallo R., A new subtype of human T-cell leukemia virus (HTLV-II) associated with a T-cell variant of hairy cell leukemia, 10.1126/science.6981847
  3. Bartman M. T., Kaidarova Z., Hirschkorn D., Sacher R. A., Fridey J., Garratty G., Gibble J., Smith J. W., Newman B., Yeo A. E., Murphy E. L., , Long-term increases in lymphocytes and platelets in human T-lymphotropic virus type II infection, 10.1182/blood-2008-05-155960
  4. Kannian Priya, Green Patrick L., Human T Lymphotropic Virus Type 1 (HTLV-1): Molecular Biology and Oncogenesis, 10.3390/v2092037
  5. Chatr-aryamontri A., Ceol A., Peluso D., Nardozza A., Panni S., Sacco F., Tinti M., Smolyar A., Castagnoli L., Vidal M., Cusick M. E., Cesareni G., VirusMINT: a viral protein interaction database, 10.1093/nar/gkn739
  6. Bertazzoni Umberto, Turci Marco, Avesani Francesca, Di Gennaro Gianfranco, Bidoia Carlo, Romanelli Maria Grazia, Intracellular Localization and Cellular Factors Interaction of HTLV-1 and HTLV-2 Tax Proteins: Similarities and Functional Differences, 10.3390/v3050541
  7. Yu H., Braun P., Yildirim M. A., Lemmens I., Venkatesan K., Sahalie J., Hirozane-Kishikawa T., Gebreab F., Li N., Simonis N., Hao T., Rual J.-F., Dricot A., Vazquez A., Murray R. R., Simon C., Tardivo L., Tam S., Svrzikapa N., Fan C., de Smet A.-S., Motyl A., Hudson M. E., Park J., Xin X., Cusick M. E., Moore T., Boone C., Snyder M., Roth F. P., Barabasi A.-L., Tavernier J., Hill D. E., Vidal M., High-Quality Binary Protein Interaction Map of the Yeast Interactome Network, 10.1126/science.1158684
  8. Venkatesan Kavitha, Rual Jean-François, Vazquez Alexei, Stelzl Ulrich, Lemmens Irma, Hirozane-Kishikawa Tomoko, Hao Tong, Zenkner Martina, Xin Xiaofeng, Goh Kwang-Il, Yildirim Muhammed A, Simonis Nicolas, Heinzmann Kathrin, Gebreab Fana, Sahalie Julie M, Cevik Sebiha, Simon Christophe, de Smet Anne-Sophie, Dann Elizabeth, Smolyar Alex, Vinayagam Arunachalam, Yu Haiyuan, Szeto David, Borick Heather, Dricot Amélie, Klitgord Niels, Murray Ryan R, Lin Chenwei, Lalowski Maciej, Timm Jan, Rau Kirstin, Boone Charles, Braun Pascal, Cusick Michael E, Roth Frederick P, Hill David E, Tavernier Jan, Wanker Erich E, Barabási Albert-László, Vidal Marc, An empirical framework for binary interactome mapping, 10.1038/nmeth.1280
  9. Calderwood M. A., Venkatesan K., Xing L., Chase M. R., Vazquez A., Holthaus A. M., Ewence A. E., Li N., Hirozane-Kishikawa T., Hill D. E., Vidal M., Kieff E., Johannsen E., Epstein-Barr virus and virus human protein interaction maps, 10.1073/pnas.0702332104
  10. Lamesch Philippe, Li Ning, Milstein Stuart, Fan Changyu, Hao Tong, Szabo Gabor, Hu Zhenjun, Venkatesan Kavitha, Bethel Graeme, Martin Paul, Rogers Jane, Lawlor Stephanie, McLaren Stuart, Dricot Amélie, Borick Heather, Cusick Michael E., Vandenhaute Jean, Dunham Ian, Hill David E., Vidal Marc, hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes, 10.1016/j.ygeno.2006.11.012
  11. Braun Pascal, Tasan Murat, Dreze Matija, Barrios-Rodiles Miriam, Lemmens Irma, Yu Haiyuan, Sahalie Julie M, Murray Ryan R, Roncari Luba, de Smet Anne-Sophie, Venkatesan Kavitha, Rual Jean-François, Vandenhaute Jean, Cusick Michael E, Pawson Tony, Hill David E, Tavernier Jan, Wrana Jeffrey L, Roth Frederick P, Vidal Marc, An experimentally derived confidence score for binary protein-protein interactions, 10.1038/nmeth.1281
  12. Vidalain Pierre-Olivier, Boxem Mike, Ge Hui, Li Siming, Vidal Marc, Increasing specificity in high-throughput yeast two-hybrid experiments, 10.1016/j.ymeth.2003.10.001
  13. Dyer Matthew D., Murali T. M., Sobral Bruno W., The Landscape of Human Proteins Interacting with Viruses and Other Pathogens, 10.1371/journal.ppat.0040032
  14. Zhang Pan, Sridharan Deepa, Lambert Muriel W., Knockdown of μ-Calpain in Fanconi Anemia, FA-A, Cells by siRNA Restores αII Spectrin Levels and Corrects Chromosomal Instability and Defective DNA Interstrand Cross-Link Repair, 10.1021/bi100656j
  15. Viollet Benoît, Lefrançois-Martinez Anne-Marie, Henrion Alexandra, Kahn Axel, Raymondjean Michel, Martinez Antoine, Immunochemical Characterization and Transacting Properties of Upstream Stimulatory Factor Isoforms, 10.1074/jbc.271.3.1405
  16. Stuchell Melissa D., Garrus Jennifer E., Müller Barbara, Stray Kirsten M., Ghaffarian Sanaz, McKinnon Rena, Kräusslich Hans-Georg, Morham Scott G., Sundquist Wesley I., The Human Endosomal Sorting Complex Required for Transport (ESCRT-I) and Its Role in HIV-1 Budding, 10.1074/jbc.m405226200
  17. Popov Serguei, Rexach Michael, Ratner Lee, Blobel Günter, Bukrinsky Michael, Viral Protein R Regulates Docking of the HIV-1 Preintegration Complex to the Nuclear Pore Complex, 10.1074/jbc.273.21.13347
  18. Gaudray G., Gachon F., Basbous J., Biard-Piechaczyk M., Devaux C., Mesnard J.-M., The Complementary Strand of the Human T-Cell Leukemia Virus Type 1 RNA Genome Encodes a bZIP Transcription Factor That Down-Regulates Viral Transcription, 10.1128/jvi.76.24.12813-12822.2002
  19. Kesic Matthew, Doueiri Rami, Ward Michael, Semmes O John, Green Patrick L, Phosphorylation regulates human T-cell leukemia virus type 1 Rex function, 10.1186/1742-4690-6-105
  20. Shao Y, Aplin A E, ERK2 phosphorylation of serine 77 regulates Bmf pro-apoptotic activity, 10.1038/cddis.2011.137
  21. Hsu Hailing, Shu Hong-Bing, Pan Ming-Gui, Goeddel David V, TRADD–TRAF2 and TRADD–FADD Interactions Define Two Distinct TNF Receptor 1 Signal Transduction Pathways, 10.1016/s0092-8674(00)80984-8
  22. Bleumink M, Köhler R, Giaisi M, Proksch P, Krammer P H, Li-Weber M, Rocaglamide breaks TRAIL resistance in HTLV-1-associated adult T-cell leukemia/lymphoma by translational suppression of c-FLIP expression, 10.1038/cdd.2010.99
  23. Iwanaga Ritsuko, Ohtani Kiyoshi, Hayashi Takeshi, Nakamura Masataka, Molecular mechanism of cell cycle progression induced by the oncogene product Tax of human T-cell leukemia virus type I, 10.1038/sj.onc.1204304
  24. Tripp A., Liu Y., Sieburg M., Montalbano J., Wrzesinski S., Feuer G., Human T-Cell Leukemia Virus Type 1 Tax Oncoprotein Suppression of Multilineage Hematopoiesis of CD34+ Cells In Vitro, 10.1128/jvi.77.22.12152-12164.2003
  25. Liu B., Hong S., Tang Z., Yu H., Giam C.-Z., HTLV-I Tax directly binds the Cdc20-associated anaphase-promoting complex and activates it ahead of schedule, 10.1073/pnas.0406424101
  26. Joazeiro Claudio A.P, Weissman Allan M, RING Finger Proteins, 10.1016/s0092-8674(00)00077-5
  27. Soucy Teresa A., Smith Peter G., Milhollen Michael A., Berger Allison J., Gavin James M., Adhikari Sharmila, Brownell James E., Burke Kristine E., Cardin David P., Critchley Stephen, Cullis Courtney A., Doucette Amanda, Garnsey James J., Gaulin Jeffrey L., Gershman Rachel E., Lublinsky Anna R., McDonald Alice, Mizutani Hirotake, Narayanan Usha, Olhava Edward J., Peluso Stephane, Rezaei Mansoureh, Sintchak Michael D., Talreja Tina, Thomas Michael P., Traore Tary, Vyskocil Stepan, Weatherhead Gabriel S., Yu Jie, Zhang Julie, Dick Lawrence R., Claiborne Christopher F., Rolfe Mark, Bolen Joseph B., Langston Steven P., An inhibitor of NEDD8-activating enzyme as a new approach to treat cancer, 10.1038/nature07884
  28. Teo J.-L., Ma H., Nguyen C., Lam C., Kahn M., Specific inhibition of CBP/ -catenin interaction rescues defects in neuronal differentiation caused by a presenilin-1 mutation, 10.1073/pnas.0504600102
  29. Maekawa Yoichi, Minato Yoshiaki, Ishifune Chieko, Kurihara Takeshi, Kitamura Akiko, Kojima Hidefumi, Yagita Hideo, Sakata-Yanagimoto Mamiko, Saito Toshiki, Taniuchi Ichiro, Chiba Shigeru, Sone Saburo, Yasutomo Koji, Notch2 integrates signaling by the transcription factors RBP-J and CREB1 to promote T cell cytotoxicity, 10.1038/ni.1649
  30. Pancewicz J., Taylor J. M., Datta A., Baydoun H. H., Waldmann T. A., Hermine O., Nicot C., Notch signaling contributes to proliferation and tumor formation of human T-cell leukemia virus type 1-associated adult T-cell leukemia, 10.1073/pnas.1010722107
  31. Ptak Roger G., Fu William, Sanders-Beer Brigitte E., Dickerson Jonathan E., Pinney John W., Robertson David L., Rozanov Mikhail N., Katz Kenneth S., Maglott Donna R., Pruitt Kim D., Dieffenbach Carl W., Short Communication:Cataloguing the HIV Type 1 Human Protein Interaction Network, 10.1089/aid.2008.0113
  32. Uetz P., Herpesviral Protein Networks and Their Interaction with the Human Proteome, 10.1126/science.1116804
  33. Shimotohno K., Wachsman W., Takahashi Y., Golde D. W., Miwa M., Sugimura T., Chen I. S., Nucleotide sequence of the 3' region of an infectious human T-cell leukemia virus type II genome., 10.1073/pnas.81.21.6657
  34. Tamhane Ajit C., Logan Brent R., Finding the Maximum Safe Dose Level for Heteroscedastic Data, 10.1081/bip-200035413
  35. Hasler Mario, Vonk Richardus, Hothorn Ludwig A., Assessing non-inferiority of a new treatment in a three-arm trial in the presence of heteroscedasticity, 10.1002/sim.3052
  36. Xenarios I., DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions, 10.1093/nar/30.1.303
  37. Mishra G. R., Human protein reference database--2006 update, 10.1093/nar/gkj141
  38. Chatr-aryamontri A., Ceol A., Palazzi L. M., Nardelli G., Schneider M. V., Castagnoli L., Cesareni G., MINT: the Molecular INTeraction database, 10.1093/nar/gkl950