User menu

Preservation of RNA for functional analysis of separated alleles in yeast: comparison of snap-frozen and RNALater solid tissue storage methods.

Bibliographic reference Dekairelle, Anne-France ; Van der Vorst, Sébastien ; Tombal, Bertrand ; Gala, Jean-Luc. Preservation of RNA for functional analysis of separated alleles in yeast: comparison of snap-frozen and RNALater solid tissue storage methods.. In: Clinical chemistry and laboratory medicine : CCLM / FESCC, Vol. 45, no. 10, p. 1283-7 (2007)
Permanent URL http://hdl.handle.net/2078.1/11088
  1. Dekairelle A.-F., Assessment of the Transcriptional Activity of p53 Improves the Prediction of Recurrence in Superficial Transitional Cell Carcinoma of the Bladder, 10.1158/1078-0432.ccr-05-0140
  2. Flaman J. M., Frebourg T., Moreau V., Charbonnier F., Martin C., Chappuis P., Sappino A. P., Limacher I. M., Bron L., Benhattar J., A simple p53 functional assay for screening cell lines, blood, and tumors., 10.1073/pnas.92.9.3963
  3. Grotzer Michael A., Patti Ratnakar, Geoerger Birgit, Eggert Angelika, Chou Thomas T., Phillips Peter C., Biological stability of RNA isolated from RNAlater-treated brain tumor and neuroblastoma xenografts, 10.1002/(sici)1096-911x(200006)34:6<438::aid-mpo12>3.0.co;2-q
  4. Florell Scott R., Coffin Cheryl M., Holden Joseph A., Zimmermann James W., Gerwels John W., Summers Bradley K., Jones David A., Leachman Sancy A., Preservation of RNA for Functional Genomic Studies: A Multidisciplinary Tumor Bank Protocol, 10.1038/modpathol.3880267
  5. Ellis M, Clin Cancer Res, 8, 1155 (2002)
  6. Rodrigo Manoj C, Martin Douglas S, Redetzke Rebecca A, Eyster Kathleen M, A method for the extraction of high-quality RNA and protein from single small samples of arteries and veins preserved in RNAlater, 10.1016/s1056-8719(02)00218-6
  7. Mutter George L, Zahrieh David, Liu Chunmei, Neuberg Donna, Finkelstein David, Baker Heather E, Warrington Janet A, 10.1186/1471-2164-5-88
  8. Chowdary Dondapati, Lathrop Jessica, Skelton Joanne, Curtin Kathleen, Briggs Thomas, Zhang Yi, Yu Jack, Wang Yixin, Mazumder Abhijit, Prognostic Gene Expression Signatures Can Be Measured in Tissues Collected in RNAlater Preservative, 10.2353/jmoldx.2006.050056
  9. Bland J.M., Altman D.G., Comparing methods of measurement: why plotting difference against standard method is misleading, 10.1016/s0140-6736(95)91748-9
  10. Petersen PH, Clin Chem, 43, 2039 (1997)
  11. Olivier Magali, Eeles Ros, Hollstein Monica, Khan Mohammed A., Harris Curtis C., Hainaut Pierre, The IARC TP53 database: New online mutation analysis and recommendations to users, 10.1002/humu.10081
  12. Fouquet C., Rapid and Sensitive p53 Alteration Analysis in Biopsies from Lung Cancer Patients Using a Functional Assay and A Universal Oligonucleotide Array: A Prospective Study, 10.1158/1078-0432.ccr-0994-03
  13. Sakuragi Noriaki, Watari Hidemichi, Ebina Yasuhiko, Yamamoto Ritsu, Steiner Eric, Koelbl Heinz, Yano Masahiro, Tada Mitsuhiro, Moriuchi Tetsuya, Functional analysis ofp53 gene and the prognostic impact of dominant-negativep53 mutation in endometrial cancer, 10.1002/ijc.21097
  14. Antonov Janine, Goldstein Darlene R, Oberli Andrea, Baltzer Anna, Pirotta Marco, Fleischmann Achim, Altermatt Hans J, Jaggi Rolf, Reliable gene expression measurements from degraded RNA by quantitative real-time PCR depend on short amplicons and a proper normalization, 10.1038/labinvest.3700303
  15. Scicchitano Marshall S., Dalmas Deidre A., Bertiaux Melissa A., Anderson Shawn M., Turner Leah R., Thomas Roberta A., Mirable Rossana, Boyce Rogely W., Preliminary Comparison of Quantity, Quality, and Microarray Performance of RNA Extracted From Formalin-fixed, Paraffin-embedded, and Unfixed Frozen Tissue Samples, 10.1369/jhc.6a6999.2006
  16. Yang Wen, Maqsodi Botoul, Ma Yunqing, Bui Son, Crawford Kimberly, McMaster Gary, Witney Frank, Luo Yuling, Direct quantification of gene expression in homogenates of formalin-fixed, paraffin-embedded tissues, 10.2144/000112133
  17. Coudry Renata A., Meireles Sibele I., Stoyanova Radka, Cooper Harry S., Carpino Alan, Wang Xianqun, Engstrom Paul F., Clapper Margie L., Successful Application of Microarray Technology to Microdissected Formalin-Fixed, Paraffin-Embedded Tissue, 10.2353/jmoldx.2007.060004
  18. Dunmire V, Biotechniques, 33, 890 (2002)
  19. Alfredson Håkan, Lorentzon Mattias, Bäckman Stina, Bäckman Assar, Lerner Ulf H, cDNA-arrays and real-time quantitative PCR techniques in the investigation of chronic achilles tendinosis, 10.1016/s0736-0266(03)00107-4
  20. Tisserand Pascaline, Fouquet Coralie, Marck Véronique, Mallard Christine, Fabre Monique, Vielh Philippe, Soussi Thierry, ThinPrep®-processed fine-needle samples of breast are effective material for RNA- and DNA-based molecular diagnosis : Application to p53 mutation analysis, 10.1002/cncr.11258