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1. • Journal article

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   Phylogenetic analysis of the Belgian HIV-1 epidemic reveals that local transmission is almost exclusively driven by men having sex with men despite presence of large African migrant communities.

   Verhofstede, Chris Dauwe, Kenny Fransen, Katrien Van Laethem, Kristel Van den Wijngaert, Sigi Ruelle, Jean[UCL] Delforge, Marie-Luce Vancutsem, Ellen Vaira, Dolores Stoffels, Karolien Ribas, Sergio Garcia Dessilly, Géraldine[UCL] Debaisieux, Laurent Pierard, Denis Van Ranst, Marc Hayette, Marie-Pierre Deblonde, Jessica Sasse, Andre Van Beckhoven, Dominique Mortier, Virginie (2018) Infection, Genetics and Evolution — Vol. 61, p. 36-44 (2018)
2. • Journal article

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   Human Immunodeficiency Virus-2 (HIV-2): A Summary of the Present Standard of Care and Treatment Options for Individuals Living with HIV-2 in Western Europe.

   Berzow, Dirk Descamps, Diane Obermeier, Martin Charpentier, Charlotte Kaiser, Rolf Guertler, Lutz Eberle, Josef Wensing, Annemarie Sierra, Saleta Ruelle, Jean[UCL] Gomes, Perpetua Mansinho, Kamal Taylor, Ninon Jensen, Björn Döring, Matthias Stürmer, Martin Rockstroh, Jürgen Camacho, Ricardo (2021) Clinical infectious diseases — Vol. 72, no. 3, p. 503-509 (2021)
3. • Journal article

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   Short Communication: An Insertion of Seven Amino Acids in the Envelope Cytoplasmic Tail of HIV-2 Selected During Disease Progression Enhances Viral Replication.

   Dufrasne, François E.[UCL] Lucchetti, Mara[UCL] Dessilly, Géraldine[UCL] Ruelle, Jean[UCL] Martin, Anandi[UCL] Kabamba-Mukadi, Benoît[UCL] (2019) AIDS research and human retroviruses — Vol. 35, no. 2, p. 185-190 (2019)
4. • Journal article

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   HIV-2: A summary of present standard of care and treatment options for HIV-2 infected individuals living in Western Europe.

   Berzow, Dirk Descamps, Diane Obermeier, Martin Charpentier, Charlotte Kaiser, Rolf Guertler, Lutz Eberle, Josef Wensing, Annemarie Sierra, Saleta Ruelle, Jean[UCL] Gomes, Perpetua Mansinho, Kamal Taylor, Ninon Jensen, Björn Döring, Matthias Stürmer, Martin Rockstroh, Jürgen Camacho, Ricardo (2021) Clinical infectious diseases — Vol. 72, no. 3, p. 503-509 (2021)
5. • Journal article

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   Earlier Initiation of Antiretroviral Treatment Coincides With an Initial Control of the HIV-1 Sub-Subtype F1 Outbreak Among Men-Having-Sex-With-Men in Flanders, Belgium.

   Vinken, Lore Fransen, Katrien Cuypers, Lize Alexiev, Ivailo Balotta, Claudia Debaisieux, Laurent Seguin-Devaux, Carole García Ribas, Sergio Gomes, Perpétua Incardona, Francesca Kaiser, Rolf Ruelle, Jean[UCL] Sayan, Murat Paraschiv, Simona Paredes, Roger Peeters, Martine Sönnerborg, Anders Vancutsem, Ellen Vandamme, Anne-Mieke Van den Wijngaert, Sigi Van Ranst, Marc Verhofstede, Chris Stadler, Tanja Lemey, Philippe Van Laethem, Kristel (2019) Frontiers in microbiology — Vol. 10, p. 613 [1-13] (2019)
6. • Journal article

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   Polymorphisms of HIV-2 integrase and selection of resistance to raltegravir

   Perez Bercoff, Danielle Triqueneaux, Perrine[UCL] Lambert, Christine Oumar, Aboubacar Aloussane Ternes, Anne-Marie Dao, S Goubau, Patrick[UCL] Schmit, Jean-Claude Ruelle, Jean[UCL] (2011) Retrovirology — Vol. 7, p. 0 (2010)
7. • Journal article

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   Near full-length characterization and population dynamics of the human immunodeficiency virus type I circulating recombinant form 42 (CRF42-BF) in Luxembourg

   Struck, Daniel Roman, François De Landtsheer, Sébastien Servais, Jean-Yves Lambert , Christine Masquelier, Cécile Venard, Véronique Ruelle, Jean[UCL] (2015) AIDS Research and Human Retroviruses — Vol. 31, no.5, p. 554-558 (2015)
8. • Journal article

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   Single Amino Acid Substitution N659D in HIV-2 Envelope Glycoprotein (Env) Impairs Viral Release and Hampers BST-2 Antagonism.

   Dufrasne, François E.[UCL] Lombard, Catherine[UCL] Goubau, Patrick[UCL] Ruelle, Jean[UCL] (2016) Viruses — Vol. 8, no. 10, p. 285 [1-17] (2016)
9. • Journal article

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   Modulation of the NF-κB signaling pathway by the HIV-2 envelope glycoprotein and its incomplete BST-2 antagonism.

   Dufrasne, François E.[UCL] Lucchetti, Mara[UCL] Martin, Anandi[UCL] André, Emmanuel[UCL] Dessilly, Géraldine[UCL] Kabamba-Mukadi, Benoît[UCL] Goubau, Patrick[UCL] Ruelle, Jean[UCL] (2018) Virology — Vol. 513, p. 11-16 (2018)
10. • Journal article

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    Human immunodeficiency virus type 1 (HIV-1) proviral DNA load in purified CD4+ cells by LightCycler real-time PCR.

    Kabamba-Mukadi, Benoît[UCL] Henrivaux, Philippe Ruelle, Jean[UCL] Delferriere, Nicole[UCL] Bodéus, Monique[UCL] Goubau, Patrick[UCL] (2005) BMC infectious diseases — Vol. 5, no. 1, p. 15 (2005)
11. • Journal article

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    Quantitative real-time PCR on Lightcycler for the detection of human immunodeficiency virus type 2 (HIV-2).

    Ruelle, Jean[UCL] Kabamba-Mukadi, Benoît[UCL] Schutten, Martin Goubau, Patrick[UCL] (2004) Journal of virological methods — Vol. 117, no. 1, p. 67-74 (2004)
12. • Journal article

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    Study of Viral Load as A Predictive Marker of the Evolution of HIV Type 2 Infection in Burkina Faso

    Sanou, Mahamoudou Absatou Ba /Ky Assane Neya Yonli, Albert T Dufrasne, François E.[UCL] Ruelle, Jean[UCL] Kabamba-Mukadi, Benoît[UCL] Nagalo, Bolni Marius Tamboura, Mamadou Kambiré, Dinanibe Goubau, Patrick[UCL] Traore, Rasmata Simporé, Jacques (2019) Acta Scientific Microbiology — Vol. 2, no. 10, p. 91-95 (2019)
13. • Journal article

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    Immunovirological and environmental screening reveals actionable risk factors for fatal COVID-19 during post-vaccination nursing home outbreaks.

    Cuypers, Lize Keyaerts, Els Hong, Samuel Leandro Gorissen, Sarah Menezes, Soraya Maria Starick, Marick Van Elslande, Jan Weemaes, Matthias Wawina-Bokalanga, Tony Marti-Carreras, Joan Vanmechelen, Bert Van Holm, Bram Bloemen, Mandy Dogne, Jean-Michel Dufrasne, François Durkin, Keith Ruelle, Jean De Mendonca, Ricardo Wollants, Elke Vermeersch, Pieter COVID-19 Genomics Belgium Consortium[UCL] Boulouffe, Caroline Djiena, Achille Broucke, Caroline Catry, Boudewijn Lagrou, Katrien Van Ranst, Marc Neyts, Johan Baele, Guy Maes, Piet André, Emmanuel Dellicour, Simon Van Weyenbergh, Johan (2023) Nature aging — Vol. 3, no.6, p. 722-733 (2023)
14. • BookChapter

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    HIV-2 : Testing Specificities

    Ruelle, Jean[UCL] (2012) HIV Testing — [ISBN : 978-953-307-871-7]
15. • Journal article

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    HIV-1 low-level viraemia assessed with 3 commercial real-time PCR assays show high variability

    Ruelle, Jean[UCL] Debaisieux, Laurent Vancutsem, Ellen De Bel, Annelies Delforge, Marie-Luce Piérard, Denis Goubau, Patrick[UCL] (2012) BMC Infectious Diseases — Vol. 12, no. 100 (24/04/2012)
16. • Journal article

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    HIV-1 resistance and trend analysis in newly diagnosed patients in Belgium

    Muyldermans, Gaëtan Sasse, André AIDS reference laboratories Goubau, Patrick[UCL] Ruelle, Jean[UCL] (2014) Acta Clinica Belgica — Vol. 69, no. 1, p. 1-7 (Jan-Feb)
17. • Journal article

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    Transmitted drug resistance, selection of resistance mutations and moderate antiretroviral efficacy in HIV-2: analysis of the HIV-2 Belgium and Luxembourg database.

    Ruelle, Jean[UCL] Roman, François Vandenbroucke, Anne-Thérèse[UCL] Lambert, Christine Fransen, Katrien Echahidi, Fedoua Piérard, Denis Verhofstede, Chris Van Laethem, Kristel Delforge, Marie-Luce Vaira, Dolorès Schmit, Jean-Claude Goubau, Patrick[UCL] (2008) BMC Infectious Diseases — Vol. 8, p. 21 (2008)
18. • Journal article

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    Two Separate Clusters of SARS-CoV-2 Delta Variant Infections in a Group of 41 Students Travelling from India: An Illustration of the Need for Rigorous Testing and Quarantine.

    Van Elslande, Jan Kerckhofs, Femke Cuypers, Lize Wollants, Elke Potter, Barney Vankeerberghen, Anne Cattoir, Lien Holderbeke, Astrid Behillil, Sylvie Gorissen, Sarah Bloemen, Mandy Arnout, Jef Van Ranst, Marc Van Weyenbergh, Johan Maes, Piet Baele, Guy Vermeersch, Pieter André, Emmanuel On Behalf Of The Cog-Belgium Consortium, Ruelle, Jean[UCL] Kabamba-Mukadi, Benoît[UCL] Gala, Jean-Luc[UCL] Bearzatto, Bertrand[UCL] Ambroise, Jérôme[UCL] (2022) Viruses — Vol. 14, no.6, p. 1198 [1-10] (2022)
19. • Journal article

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    Genotypic evaluation of etravirine sensitivity of clinical human immunodeficiency virus type 1 (HIV-1) isolates carrying resistance mutations to nevirapine and efavirenz.

    Oumar, A A Jnaoui, Karima[UCL] Kabamba-Mukadi, Benoît[UCL] Yombi, Jean Cyr[UCL] Vandercam, Bernard[UCL] Goubau, Patrick[UCL] Ruelle, Jean[UCL] (2010) Acta Clinica Belgica (Multilingual Edition) — Vol. 65, no. 4, p. 242-444 (2010)
20. • Journal article

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    A national cohort of HIV-infected patients in Belgium : design and main characteristics

    Van Beckhoven, D. Buvé, A. Ruelle, Jean[UCL] Seyler, L. Sasse, A. (2012) Acta Clinica Belgica — Vol. 67, no.5, p. 333-7 (Sept-Oct)
21. • Journal article

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    A coding RNA sequence acts as a replication signal in cardioviruses.

    Lobert, P E Escriou, N Ruelle, Jean[UCL] Michiels, Thomas[UCL] (1999) Proceedings of the National academy of sciences of the United States of America — Vol. 96, no. 20, p. 11560-11565 (1999)
22. • Journal article

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    RegaDB: community-driven data management and analysis for infectious diseases

    Libin, Pieter Beheydt, Gertjan Deforche, Koen Imbrechts, Stijn Ferreira, Fossie Van Laethem, Kristel Theys, Kristof Carvalho, Ana Patricia Cavaco-Silva, Joana Lapadula, Giuseppe Torti, Carlo Assel, Matthias Wesner, Stefan Snoeck, Joke Ruelle, Jean[UCL] De Bel, Annelies Lacor, Patrick De Munter, Paul Van Wijngaerden, Eric Zazzi, Maurizio Kaiser, Rolf Ayouba, Ahidjo Peeters, Martine de Oliveira, Tulio Alcantara, Luiz C. J. Grossman, Zehava Sloot, Peter Otelea, Dan Paraschiv, Simona Boucher, Charles Camacho, Ricardo J. Vandamme, Anne-Mieke (2013) Bioinformatics — Vol. 29, no.11, p. 1477-1480 (1 April)
23. • Journal article

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    Dynamics of spreading of SARS-CoV-2 in a Belgian hemodialysis facility: The importance of the analysis of viral strains.

    Labriola, Laura[UCL] Ruelle, Jean[UCL] Scohy, Anaïs[UCL] Seghers, François[UCL] Perlot, Quentin[UCL] De Greef, Julien[UCL] Desmet, Christine[UCL] Romain, Cécile[UCL] Yombi, Jean Cyr[UCL] Rodriguez-Villalobos, Hector[UCL] Kabamba Mukadi, Benoît[UCL] Jadoul, Michel[UCL] (2022) Journal of medical virology — Vol. 94, no. 4, p. 1481-1487 (2022)
24. • Journal article

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    An international collaboration to standardize HIV-2 viral load assays: Results from the 2009 ACHI EV 2E quality control study

    Damond, F. Benard, A. Balotta, Claudia Böni, Jürg Cotten, Matthew Duque, Vitor Ferns, Bridget Garson, Jeremy Gomes, Perpetua Gonçalves, Fátima Gottlieb, Geoffrey Kupfer, Bernd Ruelle, Jean[UCL] Rodes, Berta Soriano, Vicente Wainberg, Mark Taieb, Audrey Matheron, Sophie Chene, Genevieve Brun-Vezinet, Francoise (2011) Journal of Clinical Microbiology — Vol. 49, no. 10, p. 3491-3497 (2011)
25. • Journal article

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    Immunovirological response to triple nucleotide reverse-transcriptase inhibitors and ritonavir-boosted protease inhibitors in treatment-naive HIV-2-infected patients: The ACHIEV2E Collaboration Study Group.

    Benard, Antoine van Sighem, Ard Taieb, Audrey Valadas, Emilia Ruelle, Jean[UCL] Soriano, Vicente Calmy, Alexandra Balotta, Claudia Damond, Florence Brun-Vezinet, Françoise Chene, Geneviève Matheron, Sophie (2011) Clinical Infectious Diseases — Vol. 52, no. 10, p. 1257-1266 (Mai 2011)

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