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Displaying 14 results.
    • Journal article
    Using hyperLOPIT to perform high-resolution mapping of the spatial proteome
    Mulvey, C.M. Breckels, L.M. Geladaki, A. Britovšek, N.K. Nightingale, D.J.H. Christoforou, A. Elzek, M. Deery, M.J. Gatto, Laurent[UCL] Lilley, K.S. (2017) Nature Protocols — Vol. 12, no.6, p. 1110-1135 (2017)
    • Journal article
    Learning from Heterogeneous Data Sources: An Application in Spatial Proteomics
    Breckels, L.M. Holden, S.B. Wojnar, D. Mulvey, C.M. Christoforou, A. Groen, A. Trotter, M.W.B. Kohlbacher, O. Lilley, K.S. Gatto, Laurent[UCL] (2016) PLoS Computational Biology — Vol. 12, no.5 (2016)
    • BookChapter
    Chapter 14: R for Proteomics
    Breckels, L.M. Gibb, S. Petyuk, V. Gatto, Laurent[UCL] (2017) New Developments in Mass Spectrometry — [ISBN : 978-1-78262-428-8]
    • Journal article
    Mass-spectrometry-based spatial proteomics data analysis using pRoloc and pRolocdata
    Gatto, Laurent[UCL] Breckels, L.M. Wieczorek, S. Burger, T. Lilley, K.S. (2014) Bioinformatics — Vol. 30, no.9, p. 1322-1324 (2014)
    • Journal article
    The effect of organelle discovery upon sub-cellular protein localisation
    Breckels, L.M. Gatto, Laurent[UCL] Christoforou, A. Groen, A.J. Lilley, K.S. Trotter, M.W.B. (2013) Journal of Proteomics — Vol. 88, p. 129-140 (2013)
    • Journal article
    A foundation for reliable spatial proteomics data analysis
    Gatto, Laurent[UCL] Breckels, L.M. Burger, T. Nightingale, D.J.H. Groen, A.J. Campbell, C. Nikolovski, N. Mulvey, C.M. Christoforou, A. Ferro, M. Lilley, K.S. (2014) Molecular and Cellular Proteomics — Vol. 13, no.8, p. 1937-1952 (2014)
    • Journal article
    A draft map of the mouse pluripotent stem cell spatial proteome
    Christoforou, A. Mulvey, C.M. Breckels, L.M. Geladaki, A. Hurrell, T. Hayward, P.C. Naake, T. Gatto, Laurent[UCL] Viner, R. Arias, A.M. Lilley, K.S. (2016) Nature Communications — Vol. 7 (2016)
    • Journal article
    LOPIT-DC: A simpler approach to high-resolution spatial proteomics
    Geladaki, A. Kocevar Britovsek, N. Breckels, L.M. Smith, T.S. Mulvey, C.M. Crook, O.M. Gatto, Laurent[UCL] Lilley, K.S. (2018) bioRxiv —
    • Journal article
    Identification of trans-Golgi network proteins in Arabidopsis thaliana root tissue
    Groen, A.J. Sancho-Andrés, G. Breckels, L.M. Gatto, Laurent[UCL] Aniento, F. Lilley, K.S. (2014) Journal of Proteome Research — Vol. 13, no.2, p. 763-776 (2014)
    • Journal article
    Deciphering thylakoid sub-compartments using a mass spectrometry-based approach
    Tomizioli, M. Lazar, C. Brugière, S. Burger, T. Salvi, D. Gatto, Laurent[UCL] Moyet, L. Breckels, L.M. Hesse, A.-M. Lilley, K.S. Seigneurin-Berny, D. Finazzi, G. Rolland, N. Ferro, M. (2014) Molecular and Cellular Proteomics — Vol. 13, no.8, p. 2147-2167 (2014)
    • Journal article
    Visualization of proteomics data using R and Bioconductor
    Gatto, Laurent[UCL] Breckels, L.M. Naake, T. Gibb, S. (2015) Proteomics — Vol. 15, no.8, p. 1375-1389 (2015)
    • Journal article
    Assessing sub-cellular resolution in spatial proteomics experiments
    Gatto, Laurent[UCL] Breckels, L.M. Lilley, K.S. (2018) bioRxiv —
    • Journal article
    A subcellular map of the human proteome
    Thul, P.J. Akesson, L. Wiking, M. Mahdessian, D. Geladaki, A. Ait Blal, H. Alm, T. Asplund, A. Björk, L. Breckels, L.M. Bäckström, A. Danielsson, F. Fagerberg, L. Fall, J. Gatto, Laurent[UCL] Gnann, C. Hober, S. Hjelmare, M. Johansson, F. Lee, S. Lindskog, C. Mulder, J. Mulvey, C.M. Nilsson, P. Oksvold, P. Rockberg, J. Schutten, R. Schwenk, J.M. Sivertsson, A. Sjöstedt, E. Skogs, M. Stadler, C. Sullivan, D.P. Tegel, H. Winsnes, C. Zhang, C. Zwahlen, M. Mardinoglu, A. Pontén, F. Von Feilitzen, K. Lilley, K.S. Uhlén, M. Lundberg, E. (2017) Science — Vol. 356, no.6340 (2017)
    • Journal article
    A Bioconductor workflow for processing and analysing spatial proteomics data [version 2; referees: 2 approved]
    Breckels, L.M. Mulvey, C.M. Lilley, K.S. Gatto, Laurent[UCL] (2018) F1000Research — Vol. 5 (2018)